Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
WNT3AP56704 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.66□□□□□ -0.06
WNT3AP56704 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.66□□□□□ -0.06
WNT3AP56704 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
WNT3AP56704 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 KRT8P24-201ENST00000560290 1559 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 CYP4F23P-201ENST00000593402 1579 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 AC090643.2-201ENST00000623442 2029 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 KRT8P29-201ENST00000420409 1371 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 MBLAC2-202ENST00000514906 1936 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.65□□□□□ -0.06
WNT3AP56704 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.65□□□□□ -0.06
WNT3AP56704 RNMTL1P1-201ENST00000454103 560 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 TUBB8P8-201ENST00000458717 1058 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 AC006122.1-201ENST00000493323 440 ntBASIC14.65□□□□□ -0.06
WNT3AP56704 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.65□□□□□ -0.06
WNT3AP56704 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC14.65□□□□□ -0.06
WNT3AP56704 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.65□□□□□ -0.06
WNT3AP56704 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.65□□□□□ -0.06
WNT3AP56704 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.65□□□□□ -0.06
WNT3AP56704 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
WNT3AP56704 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.65□□□□□ -0.06
WNT3AP56704 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
WNT3AP56704 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC14.64□□□□□ -0.07
WNT3AP56704 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.64□□□□□ -0.07
WNT3AP56704 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
WNT3AP56704 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
WNT3AP56704 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
WNT3AP56704 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.64□□□□□ -0.07
WNT3AP56704 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
WNT3AP56704 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.64□□□□□ -0.07
WNT3AP56704 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.64□□□□□ -0.07
WNT3AP56704 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 RPL18P13-201ENST00000478088 569 ntBASIC14.64□□□□□ -0.07
WNT3AP56704 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
WNT3AP56704 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.64□□□□□ -0.07
WNT3AP56704 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.64□□□□□ -0.07
WNT3AP56704 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC14.64□□□□□ -0.07
WNT3AP56704 AC124068.2-201ENST00000569473 1109 ntBASIC14.64□□□□□ -0.07
WNT3AP56704 AC008805.1-201ENST00000590892 364 ntBASIC14.64□□□□□ -0.07
WNT3AP56704 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.64□□□□□ -0.07
WNT3AP56704 AC021016.3-201ENST00000608367 477 ntBASIC14.64□□□□□ -0.07
WNT3AP56704 AL023803.2-201ENST00000620080 638 ntBASIC14.64□□□□□ -0.07
WNT3AP56704 AC133540.1-201ENST00000620845 1019 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms