Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
PER3P56645 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC13.57□□□□□ -0.24
PER3P56645 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
PER3P56645 ST20-AS1-201ENST00000560255 4223 ntBASIC13.56□□□□□ -0.24
PER3P56645 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PER3P56645 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.56□□□□□ -0.24
PER3P56645 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PER3P56645 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 AL596276.2-201ENST00000447525 331 ntBASIC13.56□□□□□ -0.24
PER3P56645 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 AL161670.2-201ENST00000557650 1227 ntBASIC13.56□□□□□ -0.24
PER3P56645 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC13.56□□□□□ -0.24
PER3P56645 RN7SL774P-201ENST00000577467 290 ntBASIC13.56□□□□□ -0.24
PER3P56645 MIR5572-201ENST00000583188 137 ntBASIC13.56□□□□□ -0.24
PER3P56645 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 AL603764.1-201ENST00000636452 321 ntBASIC13.56□□□□□ -0.24
PER3P56645 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.56□□□□□ -0.24
PER3P56645 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 C18orf15-201ENST00000623680 2534 ntBASIC13.56□□□□□ -0.24
PER3P56645 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
PER3P56645 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
PER3P56645 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PER3P56645 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.55□□□□□ -0.24
PER3P56645 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.55□□□□□ -0.24
PER3P56645 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.55□□□□□ -0.24
PER3P56645 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.55□□□□□ -0.24
PER3P56645 AC090616.6-203ENST00000579186 1945 ntBASIC13.55□□□□□ -0.24
PER3P56645 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.55□□□□□ -0.24
PER3P56645 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PER3P56645 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.55□□□□□ -0.24
PER3P56645 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.55□□□□□ -0.24
PER3P56645 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.55□□□□□ -0.24
PER3P56645 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PER3P56645 AL354877.1-201ENST00000424412 413 ntBASIC13.55□□□□□ -0.24
PER3P56645 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.55□□□□□ -0.24
PER3P56645 AC006335.1-201ENST00000445200 547 ntBASIC13.55□□□□□ -0.24
PER3P56645 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC13.55□□□□□ -0.24
PER3P56645 AC022217.1-201ENST00000521069 738 ntBASIC13.55□□□□□ -0.24
PER3P56645 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.55□□□□□ -0.24
PER3P56645 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.55□□□□□ -0.24
PER3P56645 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms