Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 AC006453.1-201ENST00000636037 1257 ntBASIC12.95□□□□□ -0.34
GFRA1P56159 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 CCT8L1P-201ENST00000465400 1674 ntBASIC12.95□□□□□ -0.34
GFRA1P56159 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.95□□□□□ -0.34
GFRA1P56159 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
GFRA1P56159 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
GFRA1P56159 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.95□□□□□ -0.34
GFRA1P56159 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
GFRA1P56159 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GFRA1P56159 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 BANF1P3-201ENST00000412556 261 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.94□□□□□ -0.34
GFRA1P56159 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.94□□□□□ -0.34
GFRA1P56159 RN7SL277P-201ENST00000481521 288 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 AC008723.1-201ENST00000506922 207 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC12.94□□□□□ -0.34
GFRA1P56159 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
GFRA1P56159 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
GFRA1P56159 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.94□□□□□ -0.34
GFRA1P56159 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 AC012044.1-201ENST00000603431 297 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 AC244517.3-201ENST00000616254 1235 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GFRA1P56159 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
GFRA1P56159 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
GFRA1P56159 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.94□□□□□ -0.34
GFRA1P56159 FAM90A2P-201ENST00000511144 1395 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 FAM90A25P-201ENST00000528404 1395 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 BX640514.1-201ENST00000583223 1918 ntBASIC12.94□□□□□ -0.34
GFRA1P56159 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC12.94□□□□□ -0.34
GFRA1P56159 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.93□□□□□ -0.34
GFRA1P56159 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
GFRA1P56159 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms