Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
GPC3P51654 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GPC3P51654 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
GPC3P51654 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
GPC3P51654 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 RNA5SP359-201ENST00000364838 113 ntBASIC15.97■□□□□ 0.15
GPC3P51654 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.97■□□□□ 0.15
GPC3P51654 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC15.97■□□□□ 0.15
GPC3P51654 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC15.97■□□□□ 0.15
GPC3P51654 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.97■□□□□ 0.15
GPC3P51654 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC15.97■□□□□ 0.15
GPC3P51654 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 AC128714.1-201ENST00000637035 887 ntBASIC15.97■□□□□ 0.15
GPC3P51654 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
GPC3P51654 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC15.97■□□□□ 0.15
GPC3P51654 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.97■□□□□ 0.15
GPC3P51654 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GPC3P51654 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GPC3P51654 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.96■□□□□ 0.15
GPC3P51654 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
GPC3P51654 AC139749.1-202ENST00000617529 3139 ntBASIC15.96■□□□□ 0.15
GPC3P51654 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
GPC3P51654 AC097376.2-205ENST00000610159 5334 ntBASIC15.96■□□□□ 0.15
GPC3P51654 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
GPC3P51654 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.96■□□□□ 0.15
GPC3P51654 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GPC3P51654 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.96■□□□□ 0.15
GPC3P51654 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.96■□□□□ 0.15
GPC3P51654 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.96■□□□□ 0.15
GPC3P51654 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.96■□□□□ 0.15
GPC3P51654 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.96■□□□□ 0.15
GPC3P51654 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC15.96■□□□□ 0.15
GPC3P51654 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GPC3P51654 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GPC3P51654 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
GPC3P51654 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
GPC3P51654 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
GPC3P51654 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
GPC3P51654 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
GPC3P51654 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.96■□□□□ 0.14
GPC3P51654 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GPC3P51654 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.95■□□□□ 0.14
GPC3P51654 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GPC3P51654 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 OR2I1P-210ENST00000642037 4691 ntBASIC15.95■□□□□ 0.14
GPC3P51654 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.95■□□□□ 0.14
GPC3P51654 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GPC3P51654 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 AC026320.2-201ENST00000434379 478 ntBASIC15.95■□□□□ 0.14
GPC3P51654 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GPC3P51654 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.95■□□□□ 0.14
GPC3P51654 TMEM198B-204ENST00000484016 896 ntBASIC15.95■□□□□ 0.14
GPC3P51654 RN7SL67P-201ENST00000492147 296 ntBASIC15.95■□□□□ 0.14
GPC3P51654 AC008723.1-201ENST00000506922 207 ntBASIC15.95■□□□□ 0.14
GPC3P51654 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.95■□□□□ 0.14
GPC3P51654 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 PHBP15-201ENST00000574228 665 ntBASIC15.95■□□□□ 0.14
GPC3P51654 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 LINC01783-202ENST00000614408 828 ntBASIC15.95■□□□□ 0.14
GPC3P51654 BX284668.2-205ENST00000619677 828 ntBASIC15.95■□□□□ 0.14
GPC3P51654 AC007718.1-201ENST00000621078 280 ntBASIC15.95■□□□□ 0.14
GPC3P51654 AL353726.2-201ENST00000623259 884 ntBASIC15.95■□□□□ 0.14
GPC3P51654 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.95■□□□□ 0.14
GPC3P51654 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GPC3P51654 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms