Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC15.67■□□□□ 0.1
BRCA2P51587 KF455155.1-201ENST00000604493 303 ntBASIC15.67■□□□□ 0.1
BRCA2P51587 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.67■□□□□ 0.1
BRCA2P51587 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC15.67■□□□□ 0.1
BRCA2P51587 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
BRCA2P51587 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
BRCA2P51587 SSR4-202ENST00000370085 526 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 SAP18P2-201ENST00000434334 459 ntBASIC15.66■□□□□ 0.1
BRCA2P51587 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 SRD5A3-AS1-203ENST00000591915 709 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BRCA2P51587 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BRCA2P51587 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 AC026884.1-201ENST00000418296 457 ntBASIC15.66■□□□□ 0.1
BRCA2P51587 CRIP1P2-201ENST00000425396 228 ntBASIC15.66■□□□□ 0.1
BRCA2P51587 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 GOLGA2P8-201ENST00000505201 779 ntBASIC15.66■□□□□ 0.1
BRCA2P51587 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.66■□□□□ 0.1
BRCA2P51587 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 LINC00643-202ENST00000553426 526 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 RPS5-205ENST00000598495 800 ntTSL 3 BASIC15.66■□□□□ 0.1
BRCA2P51587 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BRCA2P51587 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.66■□□□□ 0.1
BRCA2P51587 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRCA2P51587 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.66■□□□□ 0.1
BRCA2P51587 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
BRCA2P51587 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 ADK-205ENST00000539909 1866 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 RRNAD1-204ENST00000476229 1096 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCA2P51587 RN7SKP155-201ENST00000516031 288 ntBASIC15.65■□□□□ 0.1
BRCA2P51587 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC15.65■□□□□ 0.1
BRCA2P51587 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC15.65■□□□□ 0.1
BRCA2P51587 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC15.65■□□□□ 0.1
BRCA2P51587 AC048382.6-201ENST00000621980 1223 ntBASIC15.65■□□□□ 0.1
BRCA2P51587 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 MBIP-211ENST00000621657 1809 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCA2P51587 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 EFNA5-204ENST00000509503 637 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCA2P51587 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.65■□□□□ 0.1
BRCA2P51587 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC15.65■□□□□ 0.1
BRCA2P51587 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCA2P51587 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 AC126365.1-201ENST00000578585 1514 ntBASIC15.65■□□□□ 0.1
BRCA2P51587 AC002350.2-201ENST00000623894 1828 ntBASIC15.65■□□□□ 0.1
BRCA2P51587 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
BRCA2P51587 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC15.65■□□□□ 0.1
BRCA2P51587 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 TPT1P9-201ENST00000413759 514 ntBASIC15.65■□□□□ 0.1
BRCA2P51587 AC007881.1-201ENST00000437460 187 ntBASIC15.65■□□□□ 0.1
BRCA2P51587 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRCA2P51587 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms