Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
CENPAP49450 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.3□□□□□ -0.28
CENPAP49450 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.3□□□□□ -0.28
CENPAP49450 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.3□□□□□ -0.28
CENPAP49450 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.3□□□□□ -0.28
CENPAP49450 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.3□□□□□ -0.28
CENPAP49450 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.3□□□□□ -0.28
CENPAP49450 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CENPAP49450 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 COL6A4P2-202ENST00000504443 2753 ntBASIC13.29□□□□□ -0.28
CENPAP49450 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 ACTBP8-201ENST00000403258 1108 ntBASIC13.29□□□□□ -0.28
CENPAP49450 WDR53-203ENST00000429115 683 ntTSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.29□□□□□ -0.28
CENPAP49450 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.29□□□□□ -0.28
CENPAP49450 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 AC005252.2-201ENST00000624630 1141 ntBASIC13.29□□□□□ -0.28
CENPAP49450 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 KRT8P35-201ENST00000483942 1338 ntBASIC13.29□□□□□ -0.28
CENPAP49450 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC13.29□□□□□ -0.28
CENPAP49450 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.29□□□□□ -0.28
CENPAP49450 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC13.29□□□□□ -0.28
CENPAP49450 CIC-204ENST00000572681 8218 ntTSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC13.29□□□□□ -0.28
CENPAP49450 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CENPAP49450 AC011840.2-201ENST00000563063 1520 ntBASIC13.29□□□□□ -0.28
CENPAP49450 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.28□□□□□ -0.28
CENPAP49450 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CENPAP49450 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
CENPAP49450 EIF3FP3-201ENST00000434851 1086 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms