Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 MIR645-201ENST00000385283 94 ntBASIC17.14■□□□□ 0.33
TNNI2P48788 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.14■□□□□ 0.33
TNNI2P48788 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC17.14■□□□□ 0.33
TNNI2P48788 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC17.14■□□□□ 0.33
TNNI2P48788 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TNNI2P48788 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC17.14■□□□□ 0.33
TNNI2P48788 MIR2392-201ENST00000584881 84 ntBASIC17.14■□□□□ 0.33
TNNI2P48788 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.14■□□□□ 0.33
TNNI2P48788 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.14■□□□□ 0.33
TNNI2P48788 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC17.14■□□□□ 0.33
TNNI2P48788 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC17.14■□□□□ 0.33
TNNI2P48788 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TNNI2P48788 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.14■□□□□ 0.33
TNNI2P48788 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.13■□□□□ 0.33
TNNI2P48788 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TNNI2P48788 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC17.13■□□□□ 0.33
TNNI2P48788 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC17.13■□□□□ 0.33
TNNI2P48788 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.13■□□□□ 0.33
TNNI2P48788 ALG1L6P-201ENST00000515248 758 ntBASIC17.13■□□□□ 0.33
TNNI2P48788 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC17.13■□□□□ 0.33
TNNI2P48788 RN7SL665P-201ENST00000578793 300 ntBASIC17.13■□□□□ 0.33
TNNI2P48788 SIGLEC22P-201ENST00000599104 714 ntBASIC17.13■□□□□ 0.33
TNNI2P48788 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC17.13■□□□□ 0.33
TNNI2P48788 AC138466.5-201ENST00000624002 808 ntBASIC17.13■□□□□ 0.33
TNNI2P48788 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC17.13■□□□□ 0.33
TNNI2P48788 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.13■□□□□ 0.33
TNNI2P48788 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TNNI2P48788 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TNNI2P48788 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TNNI2P48788 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC17.13■□□□□ 0.33
TNNI2P48788 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.12■□□□□ 0.33
TNNI2P48788 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TNNI2P48788 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC17.12■□□□□ 0.33
TNNI2P48788 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 RN7SKP109-201ENST00000410592 316 ntBASIC17.12■□□□□ 0.33
TNNI2P48788 AC018638.5-201ENST00000450885 754 ntBASIC17.12■□□□□ 0.33
TNNI2P48788 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TNNI2P48788 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.12■□□□□ 0.33
TNNI2P48788 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC17.12■□□□□ 0.33
TNNI2P48788 OR5BD1P-201ENST00000532527 817 ntBASIC17.12■□□□□ 0.33
TNNI2P48788 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC17.12■□□□□ 0.33
TNNI2P48788 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 SKA2-205ENST00000580541 689 ntTSL 3 BASIC17.12■□□□□ 0.33
TNNI2P48788 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TNNI2P48788 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
TNNI2P48788 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
TNNI2P48788 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TNNI2P48788 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms