Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 RNMTL1P1-201ENST00000454103 560 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 KRT18P15-201ENST00000458108 1291 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC13.95□□□□□ -0.18
SLC6A12P48065 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC6A12P48065 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC6A12P48065 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.95□□□□□ -0.18
SLC6A12P48065 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.95□□□□□ -0.18
SLC6A12P48065 AC022748.3-201ENST00000621828 275 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 AL591471.1-201ENST00000621855 229 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 AC018629.1-201ENST00000623381 1736 ntBASIC13.95□□□□□ -0.18
SLC6A12P48065 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
SLC6A12P48065 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
SLC6A12P48065 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.95□□□□□ -0.18
SLC6A12P48065 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.95□□□□□ -0.18
SLC6A12P48065 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
SLC6A12P48065 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC6A12P48065 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.94□□□□□ -0.18
SLC6A12P48065 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
SLC6A12P48065 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 AL591846.1-201ENST00000451736 433 ntBASIC13.94□□□□□ -0.18
SLC6A12P48065 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 AC021723.1-201ENST00000486306 515 ntBASIC13.94□□□□□ -0.18
SLC6A12P48065 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC6A12P48065 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC6A12P48065 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.94□□□□□ -0.18
SLC6A12P48065 AC008805.1-201ENST00000590892 364 ntBASIC13.94□□□□□ -0.18
SLC6A12P48065 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.94□□□□□ -0.18
SLC6A12P48065 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 AC005695.3-201ENST00000614522 232 ntBASIC13.94□□□□□ -0.18
SLC6A12P48065 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
SLC6A12P48065 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
SLC6A12P48065 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
SLC6A12P48065 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.93□□□□□ -0.18
SLC6A12P48065 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 AC007952.5-201ENST00000572818 1486 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.93□□□□□ -0.18
SLC6A12P48065 TUBB1P2-201ENST00000422712 1306 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 TUBB1P1-201ENST00000503144 1300 ntBASIC13.93□□□□□ -0.18
SLC6A12P48065 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SLC6A12P48065 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms