Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 NFIC-211ENST00000641145 8399 ntBASIC17.65■□□□□ 0.42
PDE6BP35913 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
PDE6BP35913 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PDE6BP35913 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PDE6BP35913 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC17.65■□□□□ 0.42
PDE6BP35913 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PDE6BP35913 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PDE6BP35913 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 PTGER4P2-201ENST00000328411 252 ntBASIC17.64■□□□□ 0.41
PDE6BP35913 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 CDKN2C-202ENST00000371761 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 PTGER4P3-201ENST00000458150 252 ntBASIC17.64■□□□□ 0.41
PDE6BP35913 KRT18P37-201ENST00000520711 1282 ntBASIC17.64■□□□□ 0.41
PDE6BP35913 AC092862.1-201ENST00000541534 533 ntBASIC17.64■□□□□ 0.41
PDE6BP35913 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.64■□□□□ 0.41
PDE6BP35913 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 MBP-238ENST00000580402 915 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 NAV1-210ENST00000593583 726 ntBASIC17.64■□□□□ 0.41
PDE6BP35913 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC17.64■□□□□ 0.41
PDE6BP35913 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.64■□□□□ 0.41
PDE6BP35913 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PDE6BP35913 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC17.63■□□□□ 0.41
PDE6BP35913 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 AF274858.1-201ENST00000406288 372 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC17.63■□□□□ 0.41
PDE6BP35913 KRT18P4-201ENST00000422599 1288 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 AC092573.1-201ENST00000433054 884 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 GALP-202ENST00000440823 889 ntTSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 KRT18P62-201ENST00000446618 1287 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC17.63■□□□□ 0.41
PDE6BP35913 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.63■□□□□ 0.41
PDE6BP35913 CES1P2-201ENST00000566467 1242 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 MIR5001-201ENST00000580185 100 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 COQ4-204ENST00000608951 781 ntTSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 AL627230.2-201ENST00000613254 655 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 PDXDC2P-206ENST00000534700 1315 ntBASIC17.63■□□□□ 0.41
PDE6BP35913 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
PDE6BP35913 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDE6BP35913 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.63■□□□□ 0.41
PDE6BP35913 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.63■□□□□ 0.41
PDE6BP35913 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6BP35913 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.62■□□□□ 0.41
PDE6BP35913 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDE6BP35913 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.62■□□□□ 0.41
PDE6BP35913 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDE6BP35913 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms