Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 LAP3P2-201ENST00000454686 1454 ntBASIC12.49□□□□□ -0.41
CD40P25942 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 FAM90A2P-201ENST00000511144 1395 ntBASIC12.49□□□□□ -0.41
CD40P25942 FAM90A25P-201ENST00000528404 1395 ntBASIC12.49□□□□□ -0.41
CD40P25942 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 AC026320.2-201ENST00000434379 478 ntBASIC12.49□□□□□ -0.41
CD40P25942 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.49□□□□□ -0.41
CD40P25942 AL161932.2-201ENST00000435436 679 ntBASIC12.49□□□□□ -0.41
CD40P25942 TPT1P11-201ENST00000458482 498 ntBASIC12.49□□□□□ -0.41
CD40P25942 RN7SL530P-201ENST00000485097 298 ntBASIC12.49□□□□□ -0.41
CD40P25942 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.49□□□□□ -0.41
CD40P25942 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 IGLV3-15-201ENST00000518356 244 ntBASIC12.49□□□□□ -0.41
CD40P25942 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 AC124312.2-201ENST00000546615 427 ntTSL 3 BASIC12.49□□□□□ -0.41
CD40P25942 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
CD40P25942 HPN-206ENST00000597419 1212 ntTSL 5 BASIC12.49□□□□□ -0.41
CD40P25942 AC090386.2-201ENST00000623010 1039 ntBASIC12.49□□□□□ -0.41
CD40P25942 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC12.49□□□□□ -0.41
CD40P25942 AL353726.2-201ENST00000623259 884 ntBASIC12.49□□□□□ -0.41
CD40P25942 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CD40P25942 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CD40P25942 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.49□□□□□ -0.41
CD40P25942 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
CD40P25942 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 AP002353.1-201ENST00000528257 1599 ntBASIC12.48□□□□□ -0.41
CD40P25942 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC12.48□□□□□ -0.41
CD40P25942 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 AC092506.1-202ENST00000401022 528 ntBASIC12.48□□□□□ -0.41
CD40P25942 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.48□□□□□ -0.41
CD40P25942 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC12.48□□□□□ -0.41
CD40P25942 EEF1DP6-201ENST00000449232 372 ntBASIC12.48□□□□□ -0.41
CD40P25942 CEP164P1-201ENST00000455142 418 ntBASIC12.48□□□□□ -0.41
CD40P25942 DUX4L50-201ENST00000455245 715 ntBASIC12.48□□□□□ -0.41
CD40P25942 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC12.48□□□□□ -0.41
CD40P25942 AC026803.1-201ENST00000569130 274 ntBASIC12.48□□□□□ -0.41
CD40P25942 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CD40P25942 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
CD40P25942 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.48□□□□□ -0.41
CD40P25942 CDK7-214ENST00000626796 358 ntTSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.48□□□□□ -0.41
CD40P25942 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 AC113367.3-201ENST00000508316 1912 ntBASIC12.48□□□□□ -0.41
CD40P25942 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CD40P25942 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CD40P25942 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
CD40P25942 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
CD40P25942 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.47□□□□□ -0.41
CD40P25942 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
CD40P25942 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
CD40P25942 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms