Protein–RNA interactions for Protein: P25106

ACKR3, Atypical chemokine receptor 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACKR3P25106 AC078819.1-201ENST00000547454 765 ntBASIC12.68□□□□□ -0.38
ACKR3P25106 AC012085.1-201ENST00000548270 765 ntBASIC12.68□□□□□ -0.38
ACKR3P25106 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ACKR3P25106 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.68□□□□□ -0.38
ACKR3P25106 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC12.68□□□□□ -0.38
ACKR3P25106 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.68□□□□□ -0.38
ACKR3P25106 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.68□□□□□ -0.38
ACKR3P25106 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
ACKR3P25106 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC12.68□□□□□ -0.38
ACKR3P25106 CU639417.3-201ENST00000624240 1404 ntBASIC12.68□□□□□ -0.38
ACKR3P25106 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
ACKR3P25106 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.68□□□□□ -0.38
ACKR3P25106 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
ACKR3P25106 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.68□□□□□ -0.38
ACKR3P25106 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
ACKR3P25106 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ACKR3P25106 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 COX5BP8-201ENST00000416911 349 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.67□□□□□ -0.38
ACKR3P25106 CNN2P8-201ENST00000421872 913 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC12.67□□□□□ -0.38
ACKR3P25106 AC016694.1-201ENST00000434179 700 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.67□□□□□ -0.38
ACKR3P25106 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC12.67□□□□□ -0.38
ACKR3P25106 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 KRT90P-201ENST00000549264 1064 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 SORD2P-201ENST00000558556 1069 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.67□□□□□ -0.38
ACKR3P25106 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC12.67□□□□□ -0.38
ACKR3P25106 AC138951.2-201ENST00000623455 1161 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 AC006453.4-201ENST00000636949 1252 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 AC002472.3-201ENST00000640124 621 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
ACKR3P25106 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
ACKR3P25106 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 AL023775.1-201ENST00000454907 1746 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.67□□□□□ -0.38
ACKR3P25106 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
ACKR3P25106 KRT8P28-201ENST00000433288 1390 ntBASIC12.67□□□□□ -0.38
ACKR3P25106 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
ACKR3P25106 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.67□□□□□ -0.38
ACKR3P25106 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms