Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
CXCL3P19876 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL3P19876 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL3P19876 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL3P19876 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL3P19876 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CXCL3P19876 MSNP1-201ENST00000511640 1732 ntBASIC12.2□□□□□ -0.46
CXCL3P19876 CDC14B-201ENST00000375240 2547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 CLGN-201ENST00000325617 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.19□□□□□ -0.46
CXCL3P19876 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 MZF1-AS1-202ENST00000600534 2567 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CXCL3P19876 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 AC015922.1-201ENST00000421102 1152 ntBASIC12.19□□□□□ -0.46
CXCL3P19876 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.19□□□□□ -0.46
CXCL3P19876 BANF1P1-201ENST00000553684 263 ntBASIC12.19□□□□□ -0.46
CXCL3P19876 AL135744.1-201ENST00000565098 629 ntBASIC12.19□□□□□ -0.46
CXCL3P19876 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 IMPDH1P4-201ENST00000445028 1534 ntBASIC12.19□□□□□ -0.46
CXCL3P19876 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.19□□□□□ -0.46
CXCL3P19876 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 SP140L-203ENST00000415673 2665 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
CXCL3P19876 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CXCL3P19876 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 MCF2L-213ENST00000421756 3560 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CXCL3P19876 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CXCL3P19876 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.19□□□□□ -0.46
CXCL3P19876 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
CXCL3P19876 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL3P19876 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL3P19876 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 CARHSP1-202ENST00000396593 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL3P19876 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
CXCL3P19876 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
CXCL3P19876 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 AC007967.2-201ENST00000432613 625 ntBASIC12.18□□□□□ -0.46
CXCL3P19876 KRT18P2-201ENST00000447938 1258 ntBASIC12.18□□□□□ -0.46
CXCL3P19876 AC074386.1-202ENST00000463561 864 ntBASIC12.18□□□□□ -0.46
CXCL3P19876 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC12.18□□□□□ -0.46
CXCL3P19876 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL3P19876 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC12.18□□□□□ -0.46
CXCL3P19876 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC12.18□□□□□ -0.46
CXCL3P19876 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC12.18□□□□□ -0.46
CXCL3P19876 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC12.18□□□□□ -0.46
CXCL3P19876 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC12.18□□□□□ -0.46
CXCL3P19876 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC12.18□□□□□ -0.46
CXCL3P19876 MOCS1-204ENST00000373188 3358 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.18□□□□□ -0.46
CXCL3P19876 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
CXCL3P19876 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms