Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC140658.4-201ENST00000561990 352 ntBASIC15.33■□□□□ 0.04
PTPN1P18031 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PTPN1P18031 AL021578.1-201ENST00000613646 709 ntBASIC15.33■□□□□ 0.04
PTPN1P18031 SNX12-206ENST00000622259 661 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN1P18031 CU633904.3-201ENST00000624042 1029 ntBASIC15.33■□□□□ 0.04
PTPN1P18031 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN1P18031 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN1P18031 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN1P18031 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN1P18031 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN1P18031 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN1P18031 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN1P18031 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN1P18031 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN1P18031 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN1P18031 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.33■□□□□ 0.04
PTPN1P18031 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.33■□□□□ 0.04
PTPN1P18031 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
PTPN1P18031 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PTPN1P18031 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN1P18031 HPD-204ENST00000543163 1709 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 AC012617.1-204ENST00000586340 2305 ntBASIC15.32■□□□□ 0.04
PTPN1P18031 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
PTPN1P18031 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN1P18031 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 AC092580.1-201ENST00000433998 658 ntBASIC15.32■□□□□ 0.04
PTPN1P18031 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN1P18031 AC006335.1-201ENST00000445200 547 ntBASIC15.32■□□□□ 0.04
PTPN1P18031 AL133466.1-201ENST00000447582 150 ntBASIC15.32■□□□□ 0.04
PTPN1P18031 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC15.32■□□□□ 0.04
PTPN1P18031 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN1P18031 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.32■□□□□ 0.04
PTPN1P18031 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.32■□□□□ 0.04
PTPN1P18031 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
PTPN1P18031 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
PTPN1P18031 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
PTPN1P18031 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.31■□□□□ 0.04
PTPN1P18031 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN1P18031 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN1P18031 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
PTPN1P18031 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
PTPN1P18031 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN1P18031 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN1P18031 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN1P18031 POU5F1P2-201ENST00000521750 823 ntBASIC15.31■□□□□ 0.04
PTPN1P18031 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.31■□□□□ 0.04
PTPN1P18031 RN7SL574P-201ENST00000581512 297 ntBASIC15.31■□□□□ 0.04
PTPN1P18031 AC097724.1-201ENST00000609581 426 ntBASIC15.31■□□□□ 0.04
PTPN1P18031 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
PTPN1P18031 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
PTPN1P18031 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
PTPN1P18031 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
PTPN1P18031 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms