Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.56□□□□□ -0.24
PRKCAP17252 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.56□□□□□ -0.24
PRKCAP17252 INE2-201ENST00000630399 1874 ntBASIC13.56□□□□□ -0.24
PRKCAP17252 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC13.56□□□□□ -0.24
PRKCAP17252 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.56□□□□□ -0.24
PRKCAP17252 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC13.56□□□□□ -0.24
PRKCAP17252 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.56□□□□□ -0.24
PRKCAP17252 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC13.56□□□□□ -0.24
PRKCAP17252 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.56□□□□□ -0.24
PRKCAP17252 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
PRKCAP17252 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
PRKCAP17252 AP000593.2-201ENST00000542775 1433 ntBASIC13.56□□□□□ -0.24
PRKCAP17252 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.56□□□□□ -0.24
PRKCAP17252 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PRKCAP17252 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 AC020910.5-201ENST00000623668 1865 ntBASIC13.55□□□□□ -0.24
PRKCAP17252 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
PRKCAP17252 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.55□□□□□ -0.24
PRKCAP17252 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC13.55□□□□□ -0.24
PRKCAP17252 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 AC131206.1-201ENST00000538078 1211 ntBASIC13.55□□□□□ -0.24
PRKCAP17252 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.55□□□□□ -0.24
PRKCAP17252 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.55□□□□□ -0.24
PRKCAP17252 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 RHOXF1P1-202ENST00000635473 501 ntBASIC13.55□□□□□ -0.24
PRKCAP17252 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
PRKCAP17252 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.55□□□□□ -0.24
PRKCAP17252 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
PRKCAP17252 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
PRKCAP17252 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.54□□□□□ -0.24
PRKCAP17252 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 AL354989.2-201ENST00000435838 1540 ntBASIC13.54□□□□□ -0.24
PRKCAP17252 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.54□□□□□ -0.24
PRKCAP17252 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.54□□□□□ -0.24
PRKCAP17252 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
PRKCAP17252 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
PRKCAP17252 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.54□□□□□ -0.24
PRKCAP17252 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.54□□□□□ -0.24
PRKCAP17252 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
PRKCAP17252 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms