Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 ST13P19-201ENST00000442505 1124 ntBASIC15.02■□□□□ -0
CD48P09326 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.02■□□□□ -0
CD48P09326 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.02■□□□□ -0
CD48P09326 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.02■□□□□ -0
CD48P09326 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC15.02■□□□□ -0
CD48P09326 AC005962.1-201ENST00000584100 773 ntBASIC15.02■□□□□ -0
CD48P09326 EEF1DP1-201ENST00000585891 896 ntBASIC15.02■□□□□ -0
CD48P09326 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.02■□□□□ -0
CD48P09326 AC244157.2-201ENST00000616239 1006 ntBASIC15.02■□□□□ -0
CD48P09326 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.02■□□□□ -0
CD48P09326 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.02□□□□□ -0.01
CD48P09326 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC15.02□□□□□ -0.01
CD48P09326 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CD48P09326 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 CYP4F23P-201ENST00000593402 1579 ntBASIC15.02□□□□□ -0.01
CD48P09326 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC15.02□□□□□ -0.01
CD48P09326 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 FAM90A12P-201ENST00000519497 2375 ntBASIC15.02□□□□□ -0.01
CD48P09326 FAM90A24P-201ENST00000520792 2369 ntBASIC15.02□□□□□ -0.01
CD48P09326 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CD48P09326 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CD48P09326 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.02□□□□□ -0.01
CD48P09326 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 MIR658-201ENST00000385210 100 ntBASIC15.01□□□□□ -0.01
CD48P09326 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 AL354877.1-201ENST00000424412 413 ntBASIC15.01□□□□□ -0.01
CD48P09326 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.01□□□□□ -0.01
CD48P09326 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 RBM8B-201ENST00000555532 525 ntBASIC15.01□□□□□ -0.01
CD48P09326 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
CD48P09326 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 KLK3-207ENST00000595952 969 ntTSL 3 BASIC15.01□□□□□ -0.01
CD48P09326 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.01□□□□□ -0.01
CD48P09326 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.01□□□□□ -0.01
CD48P09326 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CD48P09326 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CD48P09326 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CD48P09326 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC15□□□□□ -0.01
CD48P09326 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CD48P09326 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms