Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CNOT4O95628 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 AC139712.1-201ENST00000378256 1875 ntBASIC12.99□□□□□ -0.33
CNOT4O95628 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 POLL-206ENST00000370172 2308 ntTSL 2 BASIC12.99□□□□□ -0.33
CNOT4O95628 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CNOT4O95628 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.98□□□□□ -0.33
CNOT4O95628 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 AMT-239ENST00000636865 1914 ntTSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC12.98□□□□□ -0.33
CNOT4O95628 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC12.98□□□□□ -0.33
CNOT4O95628 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
CNOT4O95628 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC12.98□□□□□ -0.33
CNOT4O95628 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 MIR6720-201ENST00000611664 98 ntBASIC12.98□□□□□ -0.33
CNOT4O95628 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC12.98□□□□□ -0.33
CNOT4O95628 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
CNOT4O95628 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
CNOT4O95628 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 E2F3P2-201ENST00000447755 1422 ntBASIC12.97□□□□□ -0.33
CNOT4O95628 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 LINC00528-201ENST00000600723 2160 ntBASIC12.97□□□□□ -0.33
CNOT4O95628 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 AL008718.2-201ENST00000609206 1313 ntBASIC12.97□□□□□ -0.33
CNOT4O95628 AC232323.1-201ENST00000540724 2099 ntBASIC12.97□□□□□ -0.33
CNOT4O95628 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC12.97□□□□□ -0.33
CNOT4O95628 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
CNOT4O95628 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC12.97□□□□□ -0.33
CNOT4O95628 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 REEP1-202ENST00000453231 940 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC12.97□□□□□ -0.33
CNOT4O95628 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
CNOT4O95628 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC12.97□□□□□ -0.33
CNOT4O95628 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.97□□□□□ -0.33
CNOT4O95628 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms