Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
PEX1O43933 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
PEX1O43933 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 AL031595.1-201ENST00000623969 4709 ntBASIC14.27□□□□□ -0.12
PEX1O43933 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC14.27□□□□□ -0.12
PEX1O43933 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.27□□□□□ -0.12
PEX1O43933 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
PEX1O43933 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 MIR497HG-202ENST00000572453 3838 ntBASIC14.27□□□□□ -0.12
PEX1O43933 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.27□□□□□ -0.12
PEX1O43933 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.27□□□□□ -0.12
PEX1O43933 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC14.27□□□□□ -0.12
PEX1O43933 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC14.27□□□□□ -0.12
PEX1O43933 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
PEX1O43933 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.27□□□□□ -0.12
PEX1O43933 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.27□□□□□ -0.13
PEX1O43933 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
PEX1O43933 C1QBPP1-201ENST00000400117 770 ntBASIC14.27□□□□□ -0.13
PEX1O43933 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.27□□□□□ -0.13
PEX1O43933 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 AC234783.1-201ENST00000441761 496 ntBASIC14.27□□□□□ -0.13
PEX1O43933 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.27□□□□□ -0.13
PEX1O43933 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.27□□□□□ -0.13
PEX1O43933 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.27□□□□□ -0.13
PEX1O43933 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.27□□□□□ -0.13
PEX1O43933 AC120045.2-201ENST00000567334 178 ntBASIC14.27□□□□□ -0.13
PEX1O43933 MIR6752-201ENST00000618442 71 ntBASIC14.27□□□□□ -0.13
PEX1O43933 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.27□□□□□ -0.13
PEX1O43933 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.27□□□□□ -0.13
PEX1O43933 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC14.27□□□□□ -0.13
PEX1O43933 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC14.27□□□□□ -0.13
PEX1O43933 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.27□□□□□ -0.13
PEX1O43933 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC14.27□□□□□ -0.13
PEX1O43933 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.27□□□□□ -0.13
PEX1O43933 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.27□□□□□ -0.13
PEX1O43933 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
PEX1O43933 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 AC018665.1-201ENST00000622927 1362 ntBASIC14.26□□□□□ -0.13
PEX1O43933 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.26□□□□□ -0.13
PEX1O43933 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 AL133267.1-201ENST00000398220 340 ntBASIC14.26□□□□□ -0.13
PEX1O43933 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 ACTG1P3-201ENST00000431775 1114 ntBASIC14.26□□□□□ -0.13
PEX1O43933 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.26□□□□□ -0.13
PEX1O43933 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.26□□□□□ -0.13
PEX1O43933 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.26□□□□□ -0.13
PEX1O43933 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 TDH-203ENST00000531764 1110 ntBASIC14.26□□□□□ -0.13
PEX1O43933 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.26□□□□□ -0.13
PEX1O43933 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.26□□□□□ -0.13
PEX1O43933 AC124283.3-201ENST00000570869 594 ntBASIC14.26□□□□□ -0.13
PEX1O43933 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.26□□□□□ -0.13
PEX1O43933 BTNL10-201ENST00000595971 695 ntBASIC14.26□□□□□ -0.13
PEX1O43933 AL512343.1-201ENST00000605837 169 ntBASIC14.26□□□□□ -0.13
PEX1O43933 RPSAP52-203ENST00000622976 1023 ntBASIC14.26□□□□□ -0.13
PEX1O43933 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
PEX1O43933 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
PEX1O43933 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms