Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM38O00635 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM38O00635 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRIM38O00635 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.69□□□□□ -0.06
TRIM38O00635 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRIM38O00635 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
TRIM38O00635 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM38O00635 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM38O00635 RN7SL11P-201ENST00000471305 293 ntBASIC14.68□□□□□ -0.06
TRIM38O00635 RN7SL720P-201ENST00000488178 304 ntBASIC14.68□□□□□ -0.06
TRIM38O00635 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.68□□□□□ -0.06
TRIM38O00635 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM38O00635 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM38O00635 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.68□□□□□ -0.06
TRIM38O00635 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 AL645939.5-201ENST00000606834 243 ntBASIC14.68□□□□□ -0.06
TRIM38O00635 AC091544.8-201ENST00000619490 361 ntBASIC14.68□□□□□ -0.06
TRIM38O00635 AL023803.2-201ENST00000620080 638 ntBASIC14.68□□□□□ -0.06
TRIM38O00635 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRIM38O00635 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 AC087386.2-201ENST00000623212 4637 ntBASIC14.68□□□□□ -0.06
TRIM38O00635 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRIM38O00635 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.68□□□□□ -0.06
TRIM38O00635 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.68□□□□□ -0.06
TRIM38O00635 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 AL360270.3-201ENST00000609118 1348 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM38O00635 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 HINT2P1-201ENST00000419438 481 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 Z97180.1-201ENST00000445173 988 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 AC104073.2-201ENST00000453737 312 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 TPT1P11-201ENST00000458482 498 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM38O00635 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.67□□□□□ -0.06
TRIM38O00635 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
TRIM38O00635 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 PTENP1-202ENST00000532280 3996 ntBASIC14.67□□□□□ -0.06
TRIM38O00635 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 APP-205ENST00000358918 2366 ntTSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
TRIM38O00635 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
TRIM38O00635 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRIM38O00635 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRIM38O00635 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms