Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC079178.1-201ENST00000420915 656 ntBASIC15.53■□□□□ 0.08
FOXN3O00409 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXN3O00409 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXN3O00409 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.53■□□□□ 0.08
FOXN3O00409 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXN3O00409 DUX4L45-201ENST00000566406 1057 ntBASIC15.53■□□□□ 0.08
FOXN3O00409 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXN3O00409 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
FOXN3O00409 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC15.53■□□□□ 0.08
FOXN3O00409 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
FOXN3O00409 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
FOXN3O00409 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
FOXN3O00409 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
FOXN3O00409 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.52■□□□□ 0.08
FOXN3O00409 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC15.52■□□□□ 0.08
FOXN3O00409 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.52■□□□□ 0.08
FOXN3O00409 RBM8B-201ENST00000555532 525 ntBASIC15.52■□□□□ 0.08
FOXN3O00409 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.52■□□□□ 0.08
FOXN3O00409 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
FOXN3O00409 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
FOXN3O00409 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.52■□□□□ 0.07
FOXN3O00409 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXN3O00409 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.52■□□□□ 0.07
FOXN3O00409 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.52■□□□□ 0.07
FOXN3O00409 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
FOXN3O00409 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
FOXN3O00409 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
FOXN3O00409 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.07
FOXN3O00409 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
FOXN3O00409 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
FOXN3O00409 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXN3O00409 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
FOXN3O00409 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.51■□□□□ 0.07
FOXN3O00409 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
FOXN3O00409 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 AL354877.1-201ENST00000424412 413 ntBASIC15.51■□□□□ 0.07
FOXN3O00409 OLR1-203ENST00000432556 950 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC15.51■□□□□ 0.07
FOXN3O00409 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.51■□□□□ 0.07
FOXN3O00409 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC15.51■□□□□ 0.07
FOXN3O00409 AC100827.2-201ENST00000563214 1194 ntBASIC15.51■□□□□ 0.07
FOXN3O00409 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.51■□□□□ 0.07
FOXN3O00409 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.51■□□□□ 0.07
FOXN3O00409 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXN3O00409 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.51■□□□□ 0.07
FOXN3O00409 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
FOXN3O00409 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
FOXN3O00409 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms