Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CCDC66A2RUB6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AL354702.1-201ENST00000442006 1960 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AL365181.3-201ENST00000605886 3222 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 NUS1P3-201ENST00000423502 862 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AL589987.1-201ENST00000453380 819 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 FAM86LP-201ENST00000478302 853 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 IGHV3-42-201ENST00000520410 361 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 FTH1-202ENST00000526640 786 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 RARRES2P5-201ENST00000564013 466 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AL355385.1-201ENST00000606123 409 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 CSPG4P11-201ENST00000560634 4910 ntBASIC15.86■□□□□ 0.13
CCDC66A2RUB6 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CCDC66A2RUB6 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.85■□□□□ 0.13
CCDC66A2RUB6 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CCDC66A2RUB6 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CCDC66A2RUB6 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms