Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01558Q9Y6Z2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01558Q9Y6Z2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
LINC01558Q9Y6Z2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
LINC01558Q9Y6Z2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 AL020996.1-203ENST00000536896 2307 ntBASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
LINC01558Q9Y6Z2 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
LINC01558Q9Y6Z2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 AC026310.3-201ENST00000625186 2373 ntBASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 FBXW4P1-201ENST00000426721 2239 ntBASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
LINC01558Q9Y6Z2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
LINC01558Q9Y6Z2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms