Protein–RNA interactions for Protein: Q9Y6N1

COX11, Cytochrome c oxidase assembly protein COX11, mitochondrial, humanhuman

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX11Q9Y6N1 MED25-214ENST00000622402 642 ntTSL 5 BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.46■□□□□ 0.23
COX11Q9Y6N1 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
COX11Q9Y6N1 AC010501.1-201ENST00000606270 1962 ntBASIC16.46■□□□□ 0.22
COX11Q9Y6N1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC16.46■□□□□ 0.22
COX11Q9Y6N1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC16.46■□□□□ 0.22
COX11Q9Y6N1 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC16.45■□□□□ 0.22
COX11Q9Y6N1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 AP004609.3-201ENST00000610705 1884 ntBASIC16.44■□□□□ 0.22
COX11Q9Y6N1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COX11Q9Y6N1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.43■□□□□ 0.22
COX11Q9Y6N1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 SMPD5-203ENST00000639008 1464 ntBASIC16.42■□□□□ 0.22
COX11Q9Y6N1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 MIR3960-201ENST00000583311 91 ntBASIC16.42■□□□□ 0.22
COX11Q9Y6N1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
COX11Q9Y6N1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
COX11Q9Y6N1 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 AC141586.4-201ENST00000624558 1573 ntBASIC16.4■□□□□ 0.22
COX11Q9Y6N1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
COX11Q9Y6N1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 9.2 ms