Protein–RNA interactions for Protein: Q9Y5G6

PCDHGA7, Protocadherin gamma-A7, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA7Q9Y5G6 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.47■■□□□ 1.19
PCDHGA7Q9Y5G6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PCDHGA7Q9Y5G6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 MIR4466-201ENST00000606121 54 ntBASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC22.46■■□□□ 1.19
PCDHGA7Q9Y5G6 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PCDHGA7Q9Y5G6 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 AC096631.2-201ENST00000436136 790 ntBASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PCDHGA7Q9Y5G6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA7Q9Y5G6 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA7Q9Y5G6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PCDHGA7Q9Y5G6 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.44■■□□□ 1.18
PCDHGA7Q9Y5G6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
PCDHGA7Q9Y5G6 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGA7Q9Y5G6 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA7Q9Y5G6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDHGA7Q9Y5G6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDHGA7Q9Y5G6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 AL512631.2-201ENST00000604634 923 ntBASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDHGA7Q9Y5G6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 MIR6089-201ENST00000616698 64 ntBASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDHGA7Q9Y5G6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 C9orf163-202ENST00000624034 2573 ntBASIC22.4■■□□□ 1.18
PCDHGA7Q9Y5G6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA7Q9Y5G6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDHGA7Q9Y5G6 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDHGA7Q9Y5G6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDHGA7Q9Y5G6 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA7Q9Y5G6 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA7Q9Y5G6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA7Q9Y5G6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDHGA7Q9Y5G6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
PCDHGA7Q9Y5G6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDHGA7Q9Y5G6 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 AF131216.4-201ENST00000638924 1588 ntBASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDHGA7Q9Y5G6 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 NFE2L3P1-201ENST00000588207 1959 ntBASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDHGA7Q9Y5G6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDHGA7Q9Y5G6 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms