Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
PCDHGC4Q9Y5F7 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
PCDHGC4Q9Y5F7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
PCDHGC4Q9Y5F7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC22.9■■□□□ 1.26
PCDHGC4Q9Y5F7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
PCDHGC4Q9Y5F7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.89■■□□□ 1.25
PCDHGC4Q9Y5F7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC22.89■■□□□ 1.25
PCDHGC4Q9Y5F7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.89■■□□□ 1.25
PCDHGC4Q9Y5F7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.89■■□□□ 1.25
PCDHGC4Q9Y5F7 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
PCDHGC4Q9Y5F7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.87■■□□□ 1.25
PCDHGC4Q9Y5F7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PCDHGC4Q9Y5F7 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PCDHGC4Q9Y5F7 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC22.84■■□□□ 1.25
PCDHGC4Q9Y5F7 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms