Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC22.2■■□□□ 1.14
PCDHB11Q9Y5F2 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB11Q9Y5F2 AL512631.2-201ENST00000604634 923 ntBASIC22.19■■□□□ 1.14
PCDHB11Q9Y5F2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB11Q9Y5F2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
PCDHB11Q9Y5F2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHB11Q9Y5F2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 PBX2P1-201ENST00000493219 1291 ntBASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHB11Q9Y5F2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHB11Q9Y5F2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHB11Q9Y5F2 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 AC142381.2-201ENST00000566120 298 ntBASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PCDHB11Q9Y5F2 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB11Q9Y5F2 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
PCDHB11Q9Y5F2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHB11Q9Y5F2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB11Q9Y5F2 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.14■■□□□ 1.13
PCDHB11Q9Y5F2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC22.14■■□□□ 1.13
PCDHB11Q9Y5F2 AC106739.1-201ENST00000617035 715 ntBASIC22.14■■□□□ 1.13
PCDHB11Q9Y5F2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PCDHB11Q9Y5F2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHB11Q9Y5F2 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 GUK1-205ENST00000366722 850 ntTSL 3 BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.12■■□□□ 1.13
PCDHB11Q9Y5F2 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB11Q9Y5F2 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB11Q9Y5F2 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHB11Q9Y5F2 LTK-203ENST00000453182 2412 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHB11Q9Y5F2 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.09■■□□□ 1.13
PCDHB11Q9Y5F2 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms