Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHB7Q9Y5E2 BX842568.3-201ENST00000418104 571 ntBASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB7Q9Y5E2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 PLD4-205ENST00000553861 667 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 AC087623.3-201ENST00000607047 1098 ntBASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 MPST-208ENST00000628507 698 ntTSL 5 BASIC24.59■■□□□ 1.53
PCDHB7Q9Y5E2 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB7Q9Y5E2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
PCDHB7Q9Y5E2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
PCDHB7Q9Y5E2 GRAMD4P2-201ENST00000423297 1097 ntBASIC24.58■■□□□ 1.53
PCDHB7Q9Y5E2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC24.58■■□□□ 1.53
PCDHB7Q9Y5E2 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHB7Q9Y5E2 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
PCDHB7Q9Y5E2 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 ALDH1A3-203ENST00000557963 1670 ntBASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 pRNA.6-201ENST00000610482 90 ntBASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 pRNA.5-201ENST00000612139 90 ntBASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 pRNA.11-201ENST00000618423 90 ntBASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 pRNA.13-201ENST00000619112 90 ntBASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC24.57■■□□□ 1.52
PCDHB7Q9Y5E2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.56■■□□□ 1.52
PCDHB7Q9Y5E2 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHB7Q9Y5E2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
PCDHB7Q9Y5E2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC24.55■■□□□ 1.52
PCDHB7Q9Y5E2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC24.55■■□□□ 1.52
PCDHB7Q9Y5E2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC24.54■■□□□ 1.52
PCDHB7Q9Y5E2 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB7Q9Y5E2 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC24.54■■□□□ 1.52
PCDHB7Q9Y5E2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
PCDHB7Q9Y5E2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PCDHB7Q9Y5E2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 AL162430.1-201ENST00000480705 870 ntBASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 AC126544.1-201ENST00000580842 1059 ntBASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC24.52■■□□□ 1.52
PCDHB7Q9Y5E2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PCDHB7Q9Y5E2 AC141586.4-201ENST00000624558 1573 ntBASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PCDHB7Q9Y5E2 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB7Q9Y5E2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
PCDHB7Q9Y5E2 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
PCDHB7Q9Y5E2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.49■■□□□ 1.51
PCDHB7Q9Y5E2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms