Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 SHD-204ENST00000599689 1729 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHB9Q9Y5E1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 ALDH1A3-203ENST00000557963 1670 ntBASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHB9Q9Y5E1 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 AC104564.3-201ENST00000582367 638 ntBASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHB9Q9Y5E1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 MIR5787-201ENST00000611784 55 ntBASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PCDHB9Q9Y5E1 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 UNC93B3-201ENST00000308076 687 ntBASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 AC005703.6-201ENST00000623265 1329 ntBASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23■■□□□ 1.27
PCDHB9Q9Y5E1 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 ABCB10P4-201ENST00000566803 2184 ntBASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PCDHB9Q9Y5E1 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB9Q9Y5E1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB9Q9Y5E1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.98■■□□□ 1.27
PCDHB9Q9Y5E1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB9Q9Y5E1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.98■■□□□ 1.27
PCDHB9Q9Y5E1 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PCDHB9Q9Y5E1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 RASSF1-AS1-201ENST00000629828 790 ntBASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 AC135279.3-201ENST00000610945 1311 ntBASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 AC093323.1-202ENST00000635031 2045 ntBASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.97■■□□□ 1.27
PCDHB9Q9Y5E1 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 AL136162.1-201ENST00000607711 1078 ntBASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.96■■□□□ 1.27
PCDHB9Q9Y5E1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
PCDHB9Q9Y5E1 AC026271.2-201ENST00000428091 497 ntBASIC22.95■■□□□ 1.26
PCDHB9Q9Y5E1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHB9Q9Y5E1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHB9Q9Y5E1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.95■■□□□ 1.26
PCDHB9Q9Y5E1 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms