Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
MRPS28Q9Y2Q9 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
MRPS28Q9Y2Q9 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 C1orf229-201ENST00000623686 2258 ntBASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 ALDH1A3-203ENST00000557963 1670 ntBASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
MRPS28Q9Y2Q9 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 AC131274.2-201ENST00000580697 1507 ntBASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
MRPS28Q9Y2Q9 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 RARRES2P2-201ENST00000394842 485 ntBASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 AC129492.7-201ENST00000622992 756 ntBASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MRPS28Q9Y2Q9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 HYI-210ENST00000486909 905 ntTSL 5 BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 U85056.1-201ENST00000616429 682 ntBASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
MRPS28Q9Y2Q9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
MRPS28Q9Y2Q9 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MRPS28Q9Y2Q9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms