Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHA4Q9UN74 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA4Q9UN74 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA4Q9UN74 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHA4Q9UN74 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
PCDHA4Q9UN74 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC26.01■■□□□ 1.75
PCDHA4Q9UN74 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PCDHA4Q9UN74 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26■■□□□ 1.75
PCDHA4Q9UN74 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDHA4Q9UN74 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA4Q9UN74 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC26■■□□□ 1.75
PCDHA4Q9UN74 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHA4Q9UN74 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
PCDHA4Q9UN74 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
PCDHA4Q9UN74 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
PCDHA4Q9UN74 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC25.98■■□□□ 1.75
PCDHA4Q9UN74 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
PCDHA4Q9UN74 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
PCDHA4Q9UN74 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.96■■□□□ 1.75
PCDHA4Q9UN74 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC25.96■■□□□ 1.75
PCDHA4Q9UN74 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
PCDHA4Q9UN74 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC25.96■■□□□ 1.75
PCDHA4Q9UN74 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
PCDHA4Q9UN74 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC25.95■■□□□ 1.75
PCDHA4Q9UN74 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC25.95■■□□□ 1.75
PCDHA4Q9UN74 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
PCDHA4Q9UN74 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 AL117332.1-201ENST00000622628 974 ntBASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.95■■□□□ 1.74
PCDHA4Q9UN74 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHA4Q9UN74 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC25.94■■□□□ 1.74
PCDHA4Q9UN74 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC25.94■■□□□ 1.74
PCDHA4Q9UN74 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA4Q9UN74 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
PCDHA4Q9UN74 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 MIR3621-201ENST00000580529 85 ntBASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
PCDHA4Q9UN74 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 AK3-203ENST00000447596 705 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
PCDHA4Q9UN74 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA4Q9UN74 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA4Q9UN74 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
PCDHA4Q9UN74 AL356740.2-201ENST00000601559 647 ntBASIC25.91■■□□□ 1.74
PCDHA4Q9UN74 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms