Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DNMT3BQ9UBC3 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
DNMT3BQ9UBC3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
DNMT3BQ9UBC3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC23.84■■□□□ 1.41
DNMT3BQ9UBC3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
DNMT3BQ9UBC3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
DNMT3BQ9UBC3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
DNMT3BQ9UBC3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
DNMT3BQ9UBC3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
DNMT3BQ9UBC3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
DNMT3BQ9UBC3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
DNMT3BQ9UBC3 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC23.83■■□□□ 1.4
DNMT3BQ9UBC3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.4
DNMT3BQ9UBC3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 MIR3181-201ENST00000578512 73 ntBASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 NKILA-201ENST00000613231 537 ntTSL 4 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC23.82■■□□□ 1.4
DNMT3BQ9UBC3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 IRS3P-201ENST00000223076 1006 ntBASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 ANKRD20A6P-201ENST00000618763 204 ntBASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 AC009086.3-201ENST00000623486 1008 ntBASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 USF2-207ENST00000595068 1612 ntTSL 5 BASIC23.81■■□□□ 1.4
DNMT3BQ9UBC3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 AC087623.3-201ENST00000607047 1098 ntBASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
DNMT3BQ9UBC3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 AL161729.1-201ENST00000604104 1402 ntBASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.79■■□□□ 1.4
DNMT3BQ9UBC3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
DNMT3BQ9UBC3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 AC233992.3-201ENST00000607491 485 ntBASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
DNMT3BQ9UBC3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
DNMT3BQ9UBC3 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 BX842568.3-201ENST00000418104 571 ntBASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.75■■□□□ 1.39
DNMT3BQ9UBC3 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC23.74■■□□□ 1.39
DNMT3BQ9UBC3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DNMT3BQ9UBC3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DNMT3BQ9UBC3 PARL-206ENST00000435888 1098 ntTSL 5 BASIC23.74■■□□□ 1.39
DNMT3BQ9UBC3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
DNMT3BQ9UBC3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms