Protein–RNA interactions for Protein: Q9NZP6

NPAP1, Nuclear pore-associated protein 1, humanhuman

Predictions only

Length 1,156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAP1Q9NZP6 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 Z92544.1-202ENST00000571933 1220 ntBASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NPAP1Q9NZP6 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 ABCB10P4-201ENST00000566803 2184 ntBASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.51■□□□□ 0.87
NPAP1Q9NZP6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 MIR4281-201ENST00000580852 62 ntBASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
NPAP1Q9NZP6 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 BX664725.1-201ENST00000438252 379 ntBASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NPAP1Q9NZP6 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 AC137630.3-201ENST00000607245 391 ntBASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 AC011551.1-201ENST00000614101 683 ntBASIC20.48■□□□□ 0.87
NPAP1Q9NZP6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 AC233723.2-201ENST00000623798 2106 ntBASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 AL121603.2-201ENST00000557373 2117 ntBASIC20.47■□□□□ 0.87
NPAP1Q9NZP6 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 KRT125P-201ENST00000546827 989 ntBASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 MIR4787-201ENST00000607364 84 ntBASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
NPAP1Q9NZP6 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
NPAP1Q9NZP6 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
NPAP1Q9NZP6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAP1Q9NZP6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NPAP1Q9NZP6 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
NPAP1Q9NZP6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAP1Q9NZP6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
NPAP1Q9NZP6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 AC127496.7-201ENST00000625110 1798 ntBASIC20.44■□□□□ 0.86
NPAP1Q9NZP6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC20.43■□□□□ 0.86
NPAP1Q9NZP6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
NPAP1Q9NZP6 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.43■□□□□ 0.86
NPAP1Q9NZP6 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms