Protein–RNA interactions for Protein: Q9NYK5

MRPL39, 39S ribosomal protein L39, mitochondrial, humanhuman

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL39Q9NYK5 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 ABCB10P4-201ENST00000566803 2184 ntBASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MRPL39Q9NYK5 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL39Q9NYK5 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL39Q9NYK5 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.66■□□□□ 0.9
MRPL39Q9NYK5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MRPL39Q9NYK5 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
MRPL39Q9NYK5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 AF131216.4-201ENST00000638924 1588 ntBASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 AC131274.2-201ENST00000580697 1507 ntBASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MRPL39Q9NYK5 KRT8P33-201ENST00000508125 1423 ntBASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MRPL39Q9NYK5 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 AC103724.3-201ENST00000564481 992 ntBASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MRPL39Q9NYK5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MRPL39Q9NYK5 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MRPL39Q9NYK5 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.6■□□□□ 0.89
MRPL39Q9NYK5 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MRPL39Q9NYK5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL39Q9NYK5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL39Q9NYK5 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL39Q9NYK5 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MRPL39Q9NYK5 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.58■□□□□ 0.89
MRPL39Q9NYK5 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.58■□□□□ 0.89
MRPL39Q9NYK5 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.58■□□□□ 0.88
MRPL39Q9NYK5 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL39Q9NYK5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
MRPL39Q9NYK5 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MRPL39Q9NYK5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MRPL39Q9NYK5 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms