Protein–RNA interactions for Protein: Q9NVH0

EXD2, Exonuclease 3'-5' domain-containing protein 2, humanhuman

Predictions only

Length 621 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXD2Q9NVH0 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
EXD2Q9NVH0 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
EXD2Q9NVH0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
EXD2Q9NVH0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.39■■□□□ 1.02
EXD2Q9NVH0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 AC010980.1-201ENST00000587192 1142 ntBASIC21.39■■□□□ 1.01
EXD2Q9NVH0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.39■■□□□ 1.01
EXD2Q9NVH0 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 AC120024.1-201ENST00000562672 995 ntBASIC21.38■■□□□ 1.01
EXD2Q9NVH0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.38■■□□□ 1.01
EXD2Q9NVH0 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 KRT18P24-201ENST00000344739 1156 ntBASIC21.37■■□□□ 1.01
EXD2Q9NVH0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 THA1P-201ENST00000590384 1145 ntBASIC21.37■■□□□ 1.01
EXD2Q9NVH0 PVT1_1.1-201ENST00000615125 194 ntBASIC21.37■■□□□ 1.01
EXD2Q9NVH0 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
EXD2Q9NVH0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
EXD2Q9NVH0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 EP400NL-214ENST00000641289 2402 ntBASIC21.35■■□□□ 1.01
EXD2Q9NVH0 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 AL033527.3-201ENST00000566366 1196 ntBASIC21.35■■□□□ 1.01
EXD2Q9NVH0 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 AL117328.2-201ENST00000624617 1940 ntBASIC21.35■■□□□ 1.01
EXD2Q9NVH0 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
EXD2Q9NVH0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD2Q9NVH0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
EXD2Q9NVH0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.34■■□□□ 1.01
EXD2Q9NVH0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.34■■□□□ 1.01
EXD2Q9NVH0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
EXD2Q9NVH0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.33■■□□□ 1.01
EXD2Q9NVH0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.33■■□□□ 1
EXD2Q9NVH0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EXD2Q9NVH0 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EXD2Q9NVH0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.33■■□□□ 1
EXD2Q9NVH0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.33■■□□□ 1
EXD2Q9NVH0 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
EXD2Q9NVH0 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.33■■□□□ 1
EXD2Q9NVH0 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
EXD2Q9NVH0 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
EXD2Q9NVH0 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
EXD2Q9NVH0 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.31■■□□□ 1
EXD2Q9NVH0 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
EXD2Q9NVH0 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms