Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 AC009299.2-201ENST00000482477 511 ntBASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 AC092028.1-203ENST00000608262 953 ntBASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
EXOSC3Q9NQT5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 CLTA-210ENST00000540080 989 ntTSL 2 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
EXOSC3Q9NQT5 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EXOSC3Q9NQT5 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 AC092068.2-201ENST00000590491 1708 ntBASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 AC133561.1-201ENST00000568600 2415 ntBASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 ANOS2P-203ENST00000472227 1816 ntBASIC20.71■□□□□ 0.91
EXOSC3Q9NQT5 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 MIR4787-201ENST00000607364 84 ntBASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EXOSC3Q9NQT5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 AC239859.2-201ENST00000444165 318 ntBASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.69■□□□□ 0.9
EXOSC3Q9NQT5 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 AC005703.6-201ENST00000623265 1329 ntBASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EXOSC3Q9NQT5 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EXOSC3Q9NQT5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms