Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
NEUROD4Q9HD90 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 AL451085.2-201ENST00000605085 799 ntBASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
NEUROD4Q9HD90 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 AC103834.1-201ENST00000520383 144 ntBASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
NEUROD4Q9HD90 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
NEUROD4Q9HD90 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.33■■□□□ 1.01
NEUROD4Q9HD90 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
NEUROD4Q9HD90 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NEUROD4Q9HD90 AC133561.1-201ENST00000568600 2415 ntBASIC21.33■■□□□ 1.01
NEUROD4Q9HD90 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
NEUROD4Q9HD90 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC21.33■■□□□ 1
NEUROD4Q9HD90 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
NEUROD4Q9HD90 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.33■■□□□ 1
NEUROD4Q9HD90 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
NEUROD4Q9HD90 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEUROD4Q9HD90 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.32■■□□□ 1
NEUROD4Q9HD90 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.32■■□□□ 1
NEUROD4Q9HD90 AC103724.3-201ENST00000564481 992 ntBASIC21.32■■□□□ 1
NEUROD4Q9HD90 DUSP8P3-201ENST00000399571 1760 ntBASIC21.32■■□□□ 1
NEUROD4Q9HD90 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEUROD4Q9HD90 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
NEUROD4Q9HD90 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.32■■□□□ 1
NEUROD4Q9HD90 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.32■■□□□ 1
NEUROD4Q9HD90 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
NEUROD4Q9HD90 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.32■■□□□ 1
NEUROD4Q9HD90 KRT8P33-201ENST00000508125 1423 ntBASIC21.31■■□□□ 1
NEUROD4Q9HD90 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC21.31■■□□□ 1
NEUROD4Q9HD90 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.31■■□□□ 1
NEUROD4Q9HD90 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEUROD4Q9HD90 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
NEUROD4Q9HD90 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
NEUROD4Q9HD90 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.3■■□□□ 1
NEUROD4Q9HD90 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.3■■□□□ 1
NEUROD4Q9HD90 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
NEUROD4Q9HD90 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.3■■□□□ 1
NEUROD4Q9HD90 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
NEUROD4Q9HD90 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
NEUROD4Q9HD90 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
NEUROD4Q9HD90 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
NEUROD4Q9HD90 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
NEUROD4Q9HD90 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.29■■□□□ 1
NEUROD4Q9HD90 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.29■■□□□ 1
NEUROD4Q9HD90 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.29■■□□□ 1
NEUROD4Q9HD90 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.29■■□□□ 1
NEUROD4Q9HD90 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.29■■□□□ 1
NEUROD4Q9HD90 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.29■■□□□ 1
NEUROD4Q9HD90 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
NEUROD4Q9HD90 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.28■■□□□ 1
NEUROD4Q9HD90 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.28■■□□□ 1
NEUROD4Q9HD90 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEUROD4Q9HD90 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.28■■□□□ 1
NEUROD4Q9HD90 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEUROD4Q9HD90 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.28■■□□□ 1
NEUROD4Q9HD90 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
NEUROD4Q9HD90 AL031848.2-201ENST00000607670 837 ntBASIC21.28■■□□□ 1
NEUROD4Q9HD90 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEUROD4Q9HD90 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
NEUROD4Q9HD90 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.27■■□□□ 1
NEUROD4Q9HD90 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.27■■□□□ 1
NEUROD4Q9HD90 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.27■■□□□ 1
NEUROD4Q9HD90 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
NEUROD4Q9HD90 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.27■■□□□ 1
NEUROD4Q9HD90 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
NEUROD4Q9HD90 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEUROD4Q9HD90 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.27■■□□□ 1
NEUROD4Q9HD90 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
NEUROD4Q9HD90 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms