Protein–RNA interactions for Protein: Q9HCN4

GPN1, GPN-loop GTPase 1, humanhuman

Predicted RBP Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1Q9HCN4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPN1Q9HCN4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPN1Q9HCN4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.23■□□□□ 0.67
GPN1Q9HCN4 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPN1Q9HCN4 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GPN1Q9HCN4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
GPN1Q9HCN4 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 MIR219A2-201ENST00000608502 1504 ntBASIC19.22■□□□□ 0.67
GPN1Q9HCN4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPN1Q9HCN4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPN1Q9HCN4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 DUX4L28-201ENST00000623687 678 ntBASIC19.2■□□□□ 0.66
GPN1Q9HCN4 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 ESRRAP2-201ENST00000418437 1549 ntBASIC19.2■□□□□ 0.66
GPN1Q9HCN4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPN1Q9HCN4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 BID-212ENST00000614949 1988 ntTSL 5 BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPN1Q9HCN4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.18■□□□□ 0.66
GPN1Q9HCN4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 AC008813.1-201ENST00000536597 885 ntBASIC19.17■□□□□ 0.66
GPN1Q9HCN4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
GPN1Q9HCN4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPN1Q9HCN4 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
GPN1Q9HCN4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPN1Q9HCN4 AC148477.6-201ENST00000623746 465 ntBASIC19.16■□□□□ 0.66
GPN1Q9HCN4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GPN1Q9HCN4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GPN1Q9HCN4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
GPN1Q9HCN4 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
GPN1Q9HCN4 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC19.15■□□□□ 0.66
GPN1Q9HCN4 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GPN1Q9HCN4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms