Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CPNE5Q9HCH3 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CPNE5Q9HCH3 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 SYT6-210ENST00000641643 1587 ntBASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 RARRES2P11-201ENST00000635158 484 ntBASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CPNE5Q9HCH3 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 RASA4CP-201ENST00000424092 1398 ntBASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.78■■□□□ 1.08
CPNE5Q9HCH3 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
CPNE5Q9HCH3 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CPNE5Q9HCH3 AC097639.1-201ENST00000565519 1891 ntBASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 AC068473.5-201ENST00000616428 2072 ntBASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CPNE5Q9HCH3 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 IRS3P-201ENST00000223076 1006 ntBASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 AC090877.2-201ENST00000558441 1738 ntBASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CPNE5Q9HCH3 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE5Q9HCH3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CPNE5Q9HCH3 AC027682.1-201ENST00000562846 899 ntBASIC21.73■■□□□ 1.07
CPNE5Q9HCH3 AC008764.7-201ENST00000593779 1081 ntBASIC21.73■■□□□ 1.07
CPNE5Q9HCH3 IKBKGP1-201ENST00000612193 1073 ntBASIC21.73■■□□□ 1.07
CPNE5Q9HCH3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CPNE5Q9HCH3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CPNE5Q9HCH3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms