Protein–RNA interactions for Protein: Q9HB40

SCPEP1, Retinoid-inducible serine carboxypeptidase, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCPEP1Q9HB40 AC093536.1-201ENST00000569153 554 ntBASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.35■□□□□ 0.69
SCPEP1Q9HB40 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 ESRRAP2-201ENST00000418437 1549 ntBASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SCPEP1Q9HB40 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
SCPEP1Q9HB40 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCPEP1Q9HB40 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.33■□□□□ 0.69
SCPEP1Q9HB40 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCPEP1Q9HB40 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SCPEP1Q9HB40 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SCPEP1Q9HB40 AC242852.2-201ENST00000615738 1807 ntBASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 ECEL1P2-201ENST00000461596 1295 ntBASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SCPEP1Q9HB40 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 MIR3648-2-201ENST00000581792 180 ntBASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 MIR3648-1-201ENST00000615959 180 ntBASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.31■□□□□ 0.68
SCPEP1Q9HB40 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 PKD1P6-201ENST00000343738 4769 ntBASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SCPEP1Q9HB40 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SCPEP1Q9HB40 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 AC090877.2-201ENST00000558441 1738 ntBASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SCPEP1Q9HB40 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC19.27■□□□□ 0.68
SCPEP1Q9HB40 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SCPEP1Q9HB40 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SCPEP1Q9HB40 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms