Protein–RNA interactions for Protein: Q9H9D4

ZNF408, Zinc finger protein 408, humanhuman

Predictions only

Length 720 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF408Q9H9D4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.99■■□□□ 1.91
ZNF408Q9H9D4 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 AC080038.1-201ENST00000611274 1154 ntBASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
ZNF408Q9H9D4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC26.97■■□□□ 1.91
ZNF408Q9H9D4 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 AL022069.1-201ENST00000568025 1636 ntBASIC26.96■■□□□ 1.91
ZNF408Q9H9D4 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC26.95■■□□□ 1.91
ZNF408Q9H9D4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.95■■□□□ 1.91
ZNF408Q9H9D4 ABHD17AP1-201ENST00000358206 933 ntBASIC26.95■■□□□ 1.9
ZNF408Q9H9D4 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC26.95■■□□□ 1.9
ZNF408Q9H9D4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.95■■□□□ 1.9
ZNF408Q9H9D4 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.95■■□□□ 1.9
ZNF408Q9H9D4 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 TERF1P2-201ENST00000583350 1212 ntBASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 LINC02228-203ENST00000641970 1355 ntBASIC26.94■■□□□ 1.9
ZNF408Q9H9D4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF408Q9H9D4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC26.93■■□□□ 1.9
ZNF408Q9H9D4 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC26.93■■□□□ 1.9
ZNF408Q9H9D4 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
ZNF408Q9H9D4 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.93■■□□□ 1.9
ZNF408Q9H9D4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
ZNF408Q9H9D4 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC26.92■■□□□ 1.9
ZNF408Q9H9D4 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ZNF408Q9H9D4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.9■■□□□ 1.9
ZNF408Q9H9D4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.89■■□□□ 1.9
ZNF408Q9H9D4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF408Q9H9D4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF408Q9H9D4 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF408Q9H9D4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
ZNF408Q9H9D4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.89
ZNF408Q9H9D4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC26.88■■□□□ 1.89
ZNF408Q9H9D4 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC26.88■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms