Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.37■■□□□ 1.81
RPAP3Q9H6T3 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
RPAP3Q9H6T3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 ALDH1A3-203ENST00000557963 1670 ntBASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC26.36■■□□□ 1.81
RPAP3Q9H6T3 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP3Q9H6T3 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC26.35■■□□□ 1.81
RPAP3Q9H6T3 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
RPAP3Q9H6T3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
RPAP3Q9H6T3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.33■■□□□ 1.81
RPAP3Q9H6T3 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
RPAP3Q9H6T3 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.33■■□□□ 1.81
RPAP3Q9H6T3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC26.33■■□□□ 1.81
RPAP3Q9H6T3 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.8
RPAP3Q9H6T3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.33■■□□□ 1.8
RPAP3Q9H6T3 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 AC022211.4-201ENST00000625094 2161 ntBASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 MIR6821-201ENST00000617625 74 ntBASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
RPAP3Q9H6T3 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP3Q9H6T3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC26.31■■□□□ 1.8
RPAP3Q9H6T3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
RPAP3Q9H6T3 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 AC233992.3-201ENST00000607491 485 ntBASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
RPAP3Q9H6T3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 IRS3P-201ENST00000223076 1006 ntBASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 AC097381.1-201ENST00000429019 1296 ntBASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 AC135731.1-201ENST00000569415 2548 ntBASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
RPAP3Q9H6T3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 BX842568.3-201ENST00000418104 571 ntBASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 RHOF-204ENST00000537265 699 ntTSL 2 BASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 pRNA.6-201ENST00000610482 90 ntBASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 pRNA.5-201ENST00000612139 90 ntBASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 pRNA.11-201ENST00000618423 90 ntBASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 pRNA.13-201ENST00000619112 90 ntBASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
RPAP3Q9H6T3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 AC104564.3-201ENST00000582367 638 ntBASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 AC087623.3-201ENST00000607047 1098 ntBASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC26.27■■□□□ 1.8
RPAP3Q9H6T3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
RPAP3Q9H6T3 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC26.25■■□□□ 1.79
RPAP3Q9H6T3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPAP3Q9H6T3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPAP3Q9H6T3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.25■■□□□ 1.79
RPAP3Q9H6T3 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms