Protein–RNA interactions for Protein: Q9H5U6

ZCCHC4, Zinc finger CCHC domain-containing protein 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC4Q9H5U6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.91■□□□□ 0.78
ZCCHC4Q9H5U6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 AL592295.1-201ENST00000400984 884 ntBASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 SPCS2P3-201ENST00000500401 656 ntBASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 AC087393.1-201ENST00000582896 145 ntBASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC4Q9H5U6 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.89■□□□□ 0.77
ZCCHC4Q9H5U6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 AL024507.2-201ENST00000606070 2574 ntBASIC19.88■□□□□ 0.77
ZCCHC4Q9H5U6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 MIR6765-201ENST00000614092 87 ntBASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC4Q9H5U6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 AL161729.1-201ENST00000604104 1402 ntBASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC4Q9H5U6 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC4Q9H5U6 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.84■□□□□ 0.77
ZCCHC4Q9H5U6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
ZCCHC4Q9H5U6 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZCCHC4Q9H5U6 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZCCHC4Q9H5U6 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZCCHC4Q9H5U6 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ZCCHC4Q9H5U6 DUX4L9-201ENST00000449051 1259 ntBASIC19.83■□□□□ 0.77
ZCCHC4Q9H5U6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.83■□□□□ 0.76
ZCCHC4Q9H5U6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 227.2 ms