Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42EP4Q9H3Q1 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDC42EP4Q9H3Q1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC23.12■■□□□ 1.29
CDC42EP4Q9H3Q1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 AL022069.1-201ENST00000568025 1636 ntBASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
CDC42EP4Q9H3Q1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 SPCS2P3-201ENST00000500401 656 ntBASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
CDC42EP4Q9H3Q1 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 EI24-204ENST00000527235 1625 ntTSL 5 BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 AC127496.7-201ENST00000625110 1798 ntBASIC23.09■■□□□ 1.29
CDC42EP4Q9H3Q1 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 AC087393.1-201ENST00000582896 145 ntBASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
CDC42EP4Q9H3Q1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.28
CDC42EP4Q9H3Q1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42EP4Q9H3Q1 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC23.08■■□□□ 1.28
CDC42EP4Q9H3Q1 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
CDC42EP4Q9H3Q1 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
CDC42EP4Q9H3Q1 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 AC018755.3-202ENST00000596210 929 ntBASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC23.07■■□□□ 1.28
CDC42EP4Q9H3Q1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CDC42EP4Q9H3Q1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 ALDH1A3-203ENST00000557963 1670 ntBASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC23.05■■□□□ 1.28
CDC42EP4Q9H3Q1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 AC131274.2-201ENST00000580697 1507 ntBASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 AL592293.1-201ENST00000502889 1188 ntBASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
CDC42EP4Q9H3Q1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms