Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC24.49■■□□□ 1.51
CDH23Q9H251 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDH23Q9H251 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC24.48■■□□□ 1.51
CDH23Q9H251 AC012414.1-201ENST00000556676 535 ntBASIC24.48■■□□□ 1.51
CDH23Q9H251 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC24.48■■□□□ 1.51
CDH23Q9H251 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDH23Q9H251 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDH23Q9H251 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDH23Q9H251 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC24.48■■□□□ 1.51
CDH23Q9H251 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC24.48■■□□□ 1.51
CDH23Q9H251 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
CDH23Q9H251 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC24.47■■□□□ 1.51
CDH23Q9H251 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
CDH23Q9H251 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.47■■□□□ 1.51
CDH23Q9H251 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDH23Q9H251 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC24.46■■□□□ 1.51
CDH23Q9H251 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC24.46■■□□□ 1.51
CDH23Q9H251 MIR6084-201ENST00000622012 110 ntBASIC24.46■■□□□ 1.51
CDH23Q9H251 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDH23Q9H251 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CDH23Q9H251 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
CDH23Q9H251 AICDA-202ENST00000537228 667 ntTSL 5 BASIC24.45■■□□□ 1.51
CDH23Q9H251 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CDH23Q9H251 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDH23Q9H251 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
CDH23Q9H251 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDH23Q9H251 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDH23Q9H251 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC24.45■■□□□ 1.5
CDH23Q9H251 PPP1R14BP3-201ENST00000509033 445 ntBASIC24.45■■□□□ 1.5
CDH23Q9H251 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
CDH23Q9H251 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC24.45■■□□□ 1.5
CDH23Q9H251 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDH23Q9H251 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CDH23Q9H251 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDH23Q9H251 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
CDH23Q9H251 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
CDH23Q9H251 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC24.43■■□□□ 1.5
CDH23Q9H251 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
CDH23Q9H251 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDH23Q9H251 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CDH23Q9H251 NCF1B-203ENST00000435988 1254 ntBASIC24.43■■□□□ 1.5
CDH23Q9H251 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.43■■□□□ 1.5
CDH23Q9H251 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.43■■□□□ 1.5
CDH23Q9H251 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CDH23Q9H251 AC080038.1-201ENST00000611274 1154 ntBASIC24.43■■□□□ 1.5
CDH23Q9H251 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CDH23Q9H251 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC24.42■■□□□ 1.5
CDH23Q9H251 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.42■■□□□ 1.5
CDH23Q9H251 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.42■■□□□ 1.5
CDH23Q9H251 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC24.42■■□□□ 1.5
CDH23Q9H251 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CDH23Q9H251 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.42■■□□□ 1.5
CDH23Q9H251 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
CDH23Q9H251 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC24.41■■□□□ 1.5
CDH23Q9H251 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC24.41■■□□□ 1.5
CDH23Q9H251 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDH23Q9H251 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CDH23Q9H251 AC026185.1-201ENST00000445748 174 ntBASIC24.41■■□□□ 1.5
CDH23Q9H251 AC093827.2-201ENST00000512654 315 ntBASIC24.41■■□□□ 1.5
CDH23Q9H251 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC24.41■■□□□ 1.5
CDH23Q9H251 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC24.41■■□□□ 1.5
CDH23Q9H251 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC24.41■■□□□ 1.5
CDH23Q9H251 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.4■■□□□ 1.5
CDH23Q9H251 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDH23Q9H251 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CDH23Q9H251 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
CDH23Q9H251 DET1-205ENST00000558413 583 ntTSL 4 BASIC24.4■■□□□ 1.5
CDH23Q9H251 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
CDH23Q9H251 MIR4651-201ENST00000582622 73 ntBASIC24.39■■□□□ 1.5
CDH23Q9H251 TMEM191A-211ENST00000637163 1067 ntBASIC24.39■■□□□ 1.5
CDH23Q9H251 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC24.39■■□□□ 1.5
CDH23Q9H251 VGF-203ENST00000611537 1622 ntTSL 5 BASIC24.39■■□□□ 1.5
CDH23Q9H251 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.39■■□□□ 1.5
CDH23Q9H251 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.39■■□□□ 1.49
CDH23Q9H251 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms