Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC13.37□□□□□ -0.27
LIMD2Q9BT23 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC13.36□□□□□ -0.27
LIMD2Q9BT23 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 TSPY13P-201ENST00000338964 914 ntBASIC13.35□□□□□ -0.27
LIMD2Q9BT23 DUX4L18-201ENST00000553347 1267 ntBASIC13.35□□□□□ -0.27
LIMD2Q9BT23 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 AC012354.3-201ENST00000623734 483 ntBASIC13.35□□□□□ -0.27
LIMD2Q9BT23 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
LIMD2Q9BT23 HLA-L-211ENST00000482052 1765 ntBASIC13.35□□□□□ -0.27
LIMD2Q9BT23 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 ATP5G2P3-201ENST00000429083 425 ntBASIC13.34□□□□□ -0.27
LIMD2Q9BT23 STK32C-205ENST00000456004 607 ntTSL 2 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 PREB-202ENST00000406567 1910 ntTSL 5 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
LIMD2Q9BT23 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
LIMD2Q9BT23 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC13.33□□□□□ -0.27
LIMD2Q9BT23 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
LIMD2Q9BT23 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
LIMD2Q9BT23 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
LIMD2Q9BT23 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
LIMD2Q9BT23 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms