Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.27■■□□□ 1
YIPF4Q9BSR8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
YIPF4Q9BSR8 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
YIPF4Q9BSR8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
YIPF4Q9BSR8 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 C9orf163-202ENST00000624034 2573 ntBASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.25■□□□□ 0.99
YIPF4Q9BSR8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 NFE2L3P1-201ENST00000588207 1959 ntBASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.24■□□□□ 0.99
YIPF4Q9BSR8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 AC133561.1-201ENST00000568600 2415 ntBASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 AC004448.1-201ENST00000458332 883 ntBASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.23■□□□□ 0.99
YIPF4Q9BSR8 ANOS2P-203ENST00000472227 1816 ntBASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
YIPF4Q9BSR8 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
YIPF4Q9BSR8 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 AC137630.3-201ENST00000607245 391 ntBASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.2■□□□□ 0.98
YIPF4Q9BSR8 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 AC131212.1-201ENST00000613771 668 ntBASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
YIPF4Q9BSR8 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.18■□□□□ 0.98
YIPF4Q9BSR8 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms