Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HDHD3Q9BSH5 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 AC131274.2-201ENST00000580697 1507 ntBASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
HDHD3Q9BSH5 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.11■□□□□ 0.65
HDHD3Q9BSH5 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HDHD3Q9BSH5 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 KRT18P60-201ENST00000312876 1297 ntBASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.09■□□□□ 0.65
HDHD3Q9BSH5 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HDHD3Q9BSH5 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HDHD3Q9BSH5 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HDHD3Q9BSH5 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 ALDH1A3-203ENST00000557963 1670 ntBASIC19.08■□□□□ 0.64
HDHD3Q9BSH5 CLDN5-201ENST00000403084 2357 ntBASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HDHD3Q9BSH5 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 AC011551.1-201ENST00000614101 683 ntBASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HDHD3Q9BSH5 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 HSD17B1P1-201ENST00000590052 955 ntBASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HDHD3Q9BSH5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms