Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL13Q99616 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL13Q99616 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.98■□□□□ 0.63
CCL13Q99616 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
CCL13Q99616 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC18.98■□□□□ 0.63
CCL13Q99616 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL13Q99616 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CCL13Q99616 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCL13Q99616 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL13Q99616 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL13Q99616 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CCL13Q99616 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.97■□□□□ 0.63
CCL13Q99616 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCL13Q99616 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
CCL13Q99616 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCL13Q99616 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.97■□□□□ 0.63
CCL13Q99616 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CCL13Q99616 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL13Q99616 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL13Q99616 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC18.96■□□□□ 0.63
CCL13Q99616 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL13Q99616 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCL13Q99616 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL13Q99616 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.96■□□□□ 0.63
CCL13Q99616 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCL13Q99616 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.96■□□□□ 0.63
CCL13Q99616 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCL13Q99616 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CCL13Q99616 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL13Q99616 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC18.95■□□□□ 0.62
CCL13Q99616 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCL13Q99616 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCL13Q99616 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCL13Q99616 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL13Q99616 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCL13Q99616 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.95■□□□□ 0.62
CCL13Q99616 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL13Q99616 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.95■□□□□ 0.62
CCL13Q99616 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL13Q99616 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCL13Q99616 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL13Q99616 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
CCL13Q99616 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
CCL13Q99616 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL13Q99616 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.94■□□□□ 0.62
CCL13Q99616 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.94■□□□□ 0.62
CCL13Q99616 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL13Q99616 AC131212.1-201ENST00000613771 668 ntBASIC18.94■□□□□ 0.62
CCL13Q99616 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCL13Q99616 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCL13Q99616 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCL13Q99616 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCL13Q99616 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.93■□□□□ 0.62
CCL13Q99616 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.93■□□□□ 0.62
CCL13Q99616 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 AL356740.2-201ENST00000601559 647 ntBASIC18.93■□□□□ 0.62
CCL13Q99616 AL117332.1-201ENST00000622628 974 ntBASIC18.93■□□□□ 0.62
CCL13Q99616 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCL13Q99616 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCL13Q99616 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCL13Q99616 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CCL13Q99616 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL13Q99616 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL13Q99616 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CCL13Q99616 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL13Q99616 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL13Q99616 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.92■□□□□ 0.62
CCL13Q99616 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CCL13Q99616 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.92■□□□□ 0.62
CCL13Q99616 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.92■□□□□ 0.62
CCL13Q99616 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.92■□□□□ 0.62
CCL13Q99616 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCL13Q99616 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCL13Q99616 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC18.91■□□□□ 0.62
CCL13Q99616 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL13Q99616 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL13Q99616 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCL13Q99616 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCL13Q99616 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.91■□□□□ 0.62
CCL13Q99616 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCL13Q99616 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.91■□□□□ 0.62
CCL13Q99616 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.91■□□□□ 0.62
CCL13Q99616 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.91■□□□□ 0.62
CCL13Q99616 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL13Q99616 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.9■□□□□ 0.62
CCL13Q99616 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL13Q99616 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CCL13Q99616 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.9■□□□□ 0.62
CCL13Q99616 MIR3621-201ENST00000580529 85 ntBASIC18.9■□□□□ 0.62
CCL13Q99616 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.9■□□□□ 0.62
CCL13Q99616 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms