Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 URA7YBL039C 1740 nt3.84□□□□□ -1.8
ATG40Q99325 ADK2YER170W 678 nt3.83□□□□□ -1.8
ATG40Q99325 YNL194CYNL194C 906 nt3.83□□□□□ -1.8
ATG40Q99325 ARC40YBR234C 1155 nt3.83□□□□□ -1.8
ATG40Q99325 LPL1YOR059C 1353 nt3.83□□□□□ -1.8
ATG40Q99325 VBA2YBR293W 1425 nt3.83□□□□□ -1.8
ATG40Q99325 ATG18YFR021W 1503 nt3.83□□□□□ -1.8
ATG40Q99325 RIM21YNL294C 1602 nt3.83□□□□□ -1.8
ATG40Q99325 MAG2YLR427W 2013 nt3.83□□□□□ -1.8
ATG40Q99325 CDC48YDL126C 2508 nt3.82□□□□□ -1.8
ATG40Q99325 CTT1YGR088W 1689 nt3.82□□□□□ -1.8
ATG40Q99325 MLF3YNL074C 1359 nt3.82□□□□□ -1.8
ATG40Q99325 ISR1YPR106W 1332 nt3.82□□□□□ -1.8
ATG40Q99325 FMP33YJL161W 543 nt3.82□□□□□ -1.8
ATG40Q99325 YAL056C-AYAL056C-A 351 nt3.82□□□□□ -1.8
ATG40Q99325 TIF4632YGL049C 2745 nt3.82□□□□□ -1.8
ATG40Q99325 MSC2YDR205W 2175 nt3.82□□□□□ -1.8
ATG40Q99325 HOF1YMR032W 2010 nt3.82□□□□□ -1.8
ATG40Q99325 GRC3YLL035W 1899 nt3.81□□□□□ -1.8
ATG40Q99325 ALG6YOR002W 1635 nt3.81□□□□□ -1.8
ATG40Q99325 GDE1YPL110C 3672 nt3.81□□□□□ -1.8
ATG40Q99325 RPS16BYDL083C 432 nt3.81□□□□□ -1.8
ATG40Q99325 RNA15YGL044C 891 nt3.81□□□□□ -1.8
ATG40Q99325 NAT2YGR147C 867 nt3.81□□□□□ -1.8
ATG40Q99325 COA3YJL062W-A 258 nt3.81□□□□□ -1.8
ATG40Q99325 YNL296WYNL296W 315 nt3.81□□□□□ -1.8
ATG40Q99325 GAD1YMR250W 1758 nt3.81□□□□□ -1.8
ATG40Q99325 YLH47YPR125W 1365 nt3.8□□□□□ -1.8
ATG40Q99325 snR7-SsnR7-S 179 nt3.8□□□□□ -1.8
ATG40Q99325 RPL12AYEL054C 498 nt3.8□□□□□ -1.8
ATG40Q99325 tR(ACG)JtR(ACG)J 73 nt3.8□□□□□ -1.8
ATG40Q99325 YHR095WYHR095W 495 nt3.8□□□□□ -1.8
ATG40Q99325 KRE9YJL174W 831 nt3.8□□□□□ -1.8
ATG40Q99325 PMA1YGL008C 2757 nt3.8□□□□□ -1.8
ATG40Q99325 APM4YOL062C 1476 nt3.79□□□□□ -1.8
ATG40Q99325 IMA3YIL172C 1770 nt3.79□□□□□ -1.8
ATG40Q99325 IMA4YJL221C 1770 nt3.79□□□□□ -1.8
ATG40Q99325 ATM1YMR301C 2073 nt3.79□□□□□ -1.8
ATG40Q99325 SUR2YDR297W 1050 nt3.79□□□□□ -1.8
ATG40Q99325 YHL034W-AYHL034W-A 462 nt3.79□□□□□ -1.8
ATG40Q99325 tS(AGA)D3tS(AGA)D3 83 nt3.79□□□□□ -1.8
ATG40Q99325 YIL021C-AYIL021C-A 270 nt3.79□□□□□ -1.8
ATG40Q99325 ATG17YLR423C 1254 nt3.79□□□□□ -1.8
ATG40Q99325 NMD3YHR170W 1557 nt3.79□□□□□ -1.8
ATG40Q99325 SWC3YAL011W 1878 nt3.79□□□□□ -1.8
ATG40Q99325 OLE1YGL055W 1533 nt3.79□□□□□ -1.8
ATG40Q99325 NOP58YOR310C 1536 nt3.79□□□□□ -1.8
ATG40Q99325 CAB3YKL088W 1716 nt3.78□□□□□ -1.8
ATG40Q99325 FZO1YBR179C 2568 nt3.78□□□□□ -1.8
ATG40Q99325 LYS2YBR115C 4179 nt3.78□□□□□ -1.8
ATG40Q99325 SRV2YNL138W 1581 nt3.78□□□□□ -1.8
ATG40Q99325 YDL012CYDL012C 324 nt3.78□□□□□ -1.8
ATG40Q99325 YIL165CYIL165C 360 nt3.78□□□□□ -1.8
ATG40Q99325 YBR016WYBR016W 387 nt3.78□□□□□ -1.8
ATG40Q99325 CBP3YPL215W 1008 nt3.78□□□□□ -1.8
ATG40Q99325 FDC1YDR539W 1512 nt3.78□□□□□ -1.8
ATG40Q99325 DPB2YPR175W 2070 nt3.78□□□□□ -1.8
ATG40Q99325 ZPR1YGR211W 1461 nt3.78□□□□□ -1.8
ATG40Q99325 GAL4YPL248C 2646 nt3.77□□□□□ -1.81
ATG40Q99325 PEX7YDR142C 1128 nt3.77□□□□□ -1.81
ATG40Q99325 TVP38YKR088C 1014 nt3.77□□□□□ -1.81
ATG40Q99325 NMA1YLR328W 1206 nt3.77□□□□□ -1.81
ATG40Q99325 POP4YBR257W 840 nt3.77□□□□□ -1.81
ATG40Q99325 RTC1YOL138C 4026 nt3.77□□□□□ -1.81
ATG40Q99325 ABF1YKL112W 2196 nt3.77□□□□□ -1.81
ATG40Q99325 PAH1YMR165C 2589 nt3.77□□□□□ -1.81
ATG40Q99325 PER1YCR044C 1074 nt3.76□□□□□ -1.81
ATG40Q99325 NUP42YDR192C 1293 nt3.76□□□□□ -1.81
ATG40Q99325 YER145C-AYER145C-A 438 nt3.76□□□□□ -1.81
ATG40Q99325 YHR145CYHR145C 357 nt3.76□□□□□ -1.81
ATG40Q99325 UBI4YLL039C 1146 nt3.76□□□□□ -1.81
ATG40Q99325 GPI12YMR281W 915 nt3.76□□□□□ -1.81
ATG40Q99325 YGP1YNL160W 1065 nt3.76□□□□□ -1.81
ATG40Q99325 MPH2YDL247W 1830 nt3.76□□□□□ -1.81
ATG40Q99325 KRS1YDR037W 1776 nt3.76□□□□□ -1.81
ATG40Q99325 IMD2YHR216W 1572 nt3.76□□□□□ -1.81
ATG40Q99325 FHL1YPR104C 2811 nt3.76□□□□□ -1.81
ATG40Q99325 FRE1YLR214W 2061 nt3.75□□□□□ -1.81
ATG40Q99325 YHR214WYHR214W 612 nt3.75□□□□□ -1.81
ATG40Q99325 YJL211CYJL211C 444 nt3.75□□□□□ -1.81
ATG40Q99325 YJR012CYJR012C 624 nt3.75□□□□□ -1.81
ATG40Q99325 CDC42YLR229C 576 nt3.75□□□□□ -1.81
ATG40Q99325 YAR066WYAR066W 612 nt3.75□□□□□ -1.81
ATG40Q99325 CSR1YLR380W 1227 nt3.75□□□□□ -1.81
ATG40Q99325 UBA3YPR066W 900 nt3.75□□□□□ -1.81
ATG40Q99325 HRK1YOR267C 2280 nt3.75□□□□□ -1.81
ATG40Q99325 SAC1YKL212W 1872 nt3.75□□□□□ -1.81
ATG40Q99325 MET4YNL103W 2019 nt3.75□□□□□ -1.81
ATG40Q99325 YMR221CYMR221C 1515 nt3.75□□□□□ -1.81
ATG40Q99325 RSM10YDR041W 612 nt3.74□□□□□ -1.81
ATG40Q99325 RRP45YDR280W 918 nt3.74□□□□□ -1.81
ATG40Q99325 ASP1YDR321W 1146 nt3.74□□□□□ -1.81
ATG40Q99325 YHR193C-AYHR193C-A 375 nt3.74□□□□□ -1.81
ATG40Q99325 ATG33YLR356W 594 nt3.74□□□□□ -1.81
ATG40Q99325 FBP1YLR377C 1047 nt3.74□□□□□ -1.81
ATG40Q99325 CIN5YOR028C 888 nt3.74□□□□□ -1.81
ATG40Q99325 MGR2YPL098C 342 nt3.74□□□□□ -1.81
ATG40Q99325 APE1YKL103C 1545 nt3.74□□□□□ -1.81
ATG40Q99325 MPP10YJR002W 1782 nt3.74□□□□□ -1.81
ATG40Q99325 PRD1YCL057W 2139 nt3.73□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 15.4 ms