Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHB18PQ96TA0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB18PQ96TA0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB18PQ96TA0 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB18PQ96TA0 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
PCDHB18PQ96TA0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 SNX5-217ENST00000606557 1087 ntBASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC24.14■■□□□ 1.45
PCDHB18PQ96TA0 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
PCDHB18PQ96TA0 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.12■■□□□ 1.45
PCDHB18PQ96TA0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 PRTG-204ENST00000561292 833 ntTSL 3 BASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 DUSP8P3-201ENST00000399571 1760 ntBASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PCDHB18PQ96TA0 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PCDHB18PQ96TA0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 RARRES2P1-201ENST00000474487 481 ntBASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
PCDHB18PQ96TA0 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.08■■□□□ 1.45
PCDHB18PQ96TA0 AC012676.1-201ENST00000574705 1949 ntBASIC24.08■■□□□ 1.44
PCDHB18PQ96TA0 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 AC021242.3-201ENST00000607598 1377 ntBASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PCDHB18PQ96TA0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB18PQ96TA0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHB18PQ96TA0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHB18PQ96TA0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC24.06■■□□□ 1.44
PCDHB18PQ96TA0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
PCDHB18PQ96TA0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC24.06■■□□□ 1.44
PCDHB18PQ96TA0 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.05■■□□□ 1.44
PCDHB18PQ96TA0 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PCDHB18PQ96TA0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms