Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
SPENQ96T58 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPENQ96T58 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
SPENQ96T58 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.7■□□□□ 0.9
SPENQ96T58 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPENQ96T58 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SPENQ96T58 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.7■□□□□ 0.9
SPENQ96T58 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.7■□□□□ 0.9
SPENQ96T58 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.7■□□□□ 0.9
SPENQ96T58 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.7■□□□□ 0.9
SPENQ96T58 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.7■□□□□ 0.9
SPENQ96T58 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPENQ96T58 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.7■□□□□ 0.9
SPENQ96T58 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SPENQ96T58 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
SPENQ96T58 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.69■□□□□ 0.9
SPENQ96T58 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPENQ96T58 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPENQ96T58 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC20.69■□□□□ 0.9
SPENQ96T58 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPENQ96T58 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPENQ96T58 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPENQ96T58 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPENQ96T58 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SPENQ96T58 AC123595.1-201ENST00000440769 1046 ntBASIC20.69■□□□□ 0.9
SPENQ96T58 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPENQ96T58 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.68■□□□□ 0.9
SPENQ96T58 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPENQ96T58 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.68■□□□□ 0.9
SPENQ96T58 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.68■□□□□ 0.9
SPENQ96T58 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.68■□□□□ 0.9
SPENQ96T58 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SPENQ96T58 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPENQ96T58 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.67■□□□□ 0.9
SPENQ96T58 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SPENQ96T58 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPENQ96T58 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
SPENQ96T58 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.67■□□□□ 0.9
SPENQ96T58 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.67■□□□□ 0.9
SPENQ96T58 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPENQ96T58 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.67■□□□□ 0.9
SPENQ96T58 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SPENQ96T58 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SPENQ96T58 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
SPENQ96T58 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPENQ96T58 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPENQ96T58 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.66■□□□□ 0.9
SPENQ96T58 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.66■□□□□ 0.9
SPENQ96T58 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPENQ96T58 AC092803.2-201ENST00000564287 1899 ntBASIC20.66■□□□□ 0.9
SPENQ96T58 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPENQ96T58 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPENQ96T58 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.66■□□□□ 0.9
SPENQ96T58 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.65■□□□□ 0.9
SPENQ96T58 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
SPENQ96T58 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPENQ96T58 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPENQ96T58 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPENQ96T58 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPENQ96T58 ABHD17AP1-201ENST00000358206 933 ntBASIC20.65■□□□□ 0.9
SPENQ96T58 ESRRAP2-201ENST00000418437 1549 ntBASIC20.65■□□□□ 0.9
SPENQ96T58 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.65■□□□□ 0.9
SPENQ96T58 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPENQ96T58 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.65■□□□□ 0.9
SPENQ96T58 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPENQ96T58 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
SPENQ96T58 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SPENQ96T58 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.64■□□□□ 0.9
SPENQ96T58 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPENQ96T58 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPENQ96T58 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SPENQ96T58 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPENQ96T58 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SPENQ96T58 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SPENQ96T58 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SPENQ96T58 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SPENQ96T58 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.64■□□□□ 0.89
SPENQ96T58 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPENQ96T58 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPENQ96T58 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.63■□□□□ 0.89
SPENQ96T58 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPENQ96T58 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SPENQ96T58 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPENQ96T58 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
SPENQ96T58 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SPENQ96T58 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.63■□□□□ 0.89
SPENQ96T58 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SPENQ96T58 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.62■□□□□ 0.89
SPENQ96T58 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SPENQ96T58 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SPENQ96T58 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
SPENQ96T58 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SPENQ96T58 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.62■□□□□ 0.89
SPENQ96T58 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms